BLASTX nr result

ID: Dioscorea21_contig00028269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028269
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK44796.1| unknown [Lotus japonicus]                               65   8e-09
ref|XP_003613942.1| hypothetical protein MTR_5g042910 [Medicago ...    63   3e-08
ref|XP_003528571.1| PREDICTED: uncharacterized protein LOC100804...    61   8e-08
ref|XP_004136794.1| PREDICTED: uncharacterized protein LOC101218...    56   3e-06
ref|XP_003520096.1| PREDICTED: uncharacterized protein LOC100798...    55   5e-06

>gb|AFK44796.1| unknown [Lotus japonicus]
          Length = 406

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
 Frame = -3

Query: 230 LTQMQWHHQKDINGVCHEEAWXXXXXXXXXXXXXXXXSVHGDCFPVASNTIG----AQML 63
           LTQ+Q+H Q D NG   E+AW                SVHGDCFP   N +G     Q+L
Sbjct: 5   LTQVQYHSQMDANGNYQEDAWFDSTSILESDSDEEFSSVHGDCFPFVGNALGGVSNTQLL 64

Query: 62  QYENASRFVGAMCKFDD 12
           QYE+AS FV + CK+++
Sbjct: 65  QYESASCFVDSGCKYEE 81


>ref|XP_003613942.1| hypothetical protein MTR_5g042910 [Medicago truncatula]
           gi|355515277|gb|AES96900.1| hypothetical protein
           MTR_5g042910 [Medicago truncatula]
          Length = 500

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
 Frame = -3

Query: 230 LTQMQWHHQKDINGVCHEEAWXXXXXXXXXXXXXXXXSVHGDCFPVAS-----NTIGAQM 66
           LTQ+Q+H Q D NGV  E+AW                SVHGDCFP AS     N    Q+
Sbjct: 94  LTQVQYHSQIDANGVYQEDAWFDSVDIIESDSDDDFSSVHGDCFPFASGNAMGNVPNTQL 153

Query: 65  LQYENASRFVGAMCKFDD 12
           LQYE++S +V + CK+++
Sbjct: 154 LQYESSSCYVDSGCKYEE 171


>ref|XP_003528571.1| PREDICTED: uncharacterized protein LOC100804224 [Glycine max]
          Length = 448

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/82 (43%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
 Frame = -3

Query: 230 LTQMQWHH--QKDINGVCHEEAWXXXXXXXXXXXXXXXXSVHGDCFPVASNTIGA----Q 69
           L Q+Q H+  +KD NG  HE+AW                SVHGD FP  SN +G+    Q
Sbjct: 76  LAQLQHHNHSKKDANGKNHEDAWFDSVSIIESESDDDFISVHGDGFPFVSNALGSVPNTQ 135

Query: 68  MLQYENASRFVGAMCKFDDLCD 3
           +LQYENAS  V +  K+D LCD
Sbjct: 136 LLQYENASCVVDSGYKYDGLCD 157


>ref|XP_004136794.1| PREDICTED: uncharacterized protein LOC101218440 [Cucumis sativus]
           gi|449494823|ref|XP_004159656.1| PREDICTED:
           uncharacterized protein LOC101229453 [Cucumis sativus]
          Length = 557

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 34/86 (39%), Positives = 43/86 (50%), Gaps = 11/86 (12%)
 Frame = -3

Query: 230 LTQMQWHH-QKDINGVCHEEAW-XXXXXXXXXXXXXXXXSVHGDC----FPVASNTIG-- 75
           LTQ+QW H Q D NG+C EE W                 SVHGD     FPV  N IG  
Sbjct: 58  LTQLQWQHSQYDANGICQEELWYDSVSLVDQSDSDEEFCSVHGDMIADGFPVVGNAIGNI 117

Query: 74  ---AQMLQYENASRFVGAMCKFDDLC 6
               Q++QYE ++ FV   CK+++ C
Sbjct: 118 PATGQVVQYERSACFVDNNCKYEEFC 143


>ref|XP_003520096.1| PREDICTED: uncharacterized protein LOC100798811 [Glycine max]
          Length = 510

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
 Frame = -3

Query: 230 LTQMQWHHQKDINGVCHEEAWXXXXXXXXXXXXXXXXSVHGDCFPVASNTIGA----QML 63
           LTQ   H Q D NG   EEAW                SVHGDCFP  +N +G+    Q+L
Sbjct: 97  LTQYHSHSQIDANGKYQEEAWFDSVSIIESDSDDEFSSVHGDCFPFPNNAMGSVPNTQLL 156

Query: 62  QYENASRFVGAMCKFDD 12
           QYE+AS  V ++ K+++
Sbjct: 157 QYESASCIVDSVHKYEE 173


Top