BLASTX nr result

ID: Dioscorea21_contig00028261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028261
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278390.1| PREDICTED: pentatricopeptide repeat-containi...    55   6e-06
emb|CAN67320.1| hypothetical protein VITISV_039345 [Vitis vinifera]    55   6e-06

>ref|XP_002278390.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17033
           [Vitis vinifera] gi|297744557|emb|CBI37819.3| unnamed
           protein product [Vitis vinifera]
          Length = 435

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 22/49 (44%), Positives = 38/49 (77%)
 Frame = +1

Query: 1   WIQGMKRTKIGYSVRTFNTVLNSCPVIVSMVHNLRCLPLSIGKFVEMVK 147
           W+Q MK + I +S+RT+N+VLNSCP+I+S++ +L+  P +I + +E +K
Sbjct: 267 WLQRMKNSSIPFSIRTYNSVLNSCPMIMSILQDLKTFPPTIDELMETLK 315


>emb|CAN67320.1| hypothetical protein VITISV_039345 [Vitis vinifera]
          Length = 371

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 22/49 (44%), Positives = 38/49 (77%)
 Frame = +1

Query: 1   WIQGMKRTKIGYSVRTFNTVLNSCPVIVSMVHNLRCLPLSIGKFVEMVK 147
           W+Q MK + I +S+RT+N+VLNSCP+I+S++ +L+  P +I + +E +K
Sbjct: 203 WLQRMKNSSIPFSIRTYNSVLNSCPMIMSILQDLKTFPPTIDELMETLK 251


Top