BLASTX nr result

ID: Dioscorea21_contig00028240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028240
         (208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom...    58   9e-07
emb|CBI19367.3| unnamed protein product [Vitis vinifera]               57   2e-06

>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
           vinifera]
          Length = 1020

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/39 (66%), Positives = 32/39 (82%)
 Frame = -1

Query: 118 AEMSSNPQPSGSQPMRPSGVGSAGPSQNFGPPMPVQFRP 2
           A M++NPQ SG+QP+RP  VGS GP QNFGPP+ +QFRP
Sbjct: 13  AGMANNPQSSGAQPLRPPAVGSMGP-QNFGPPLSMQFRP 50


>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
          Length = 1030

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/37 (67%), Positives = 31/37 (83%)
 Frame = -1

Query: 112 MSSNPQPSGSQPMRPSGVGSAGPSQNFGPPMPVQFRP 2
           M++NPQ SG+QP+RP  VGS GP QNFGPP+ +QFRP
Sbjct: 1   MANNPQSSGAQPLRPPAVGSMGP-QNFGPPLSMQFRP 36


Top