BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028234
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302035.1| GRAS family transcription factor [Populus tr...    64   2e-08
emb|CAN60709.1| hypothetical protein VITISV_027284 [Vitis vinifera]    59   5e-07
ref|XP_002529844.1| DELLA protein GAIP, putative [Ricinus commun...    57   1e-06
ref|XP_002272465.2| PREDICTED: protein SCARECROW-like [Vitis vin...    56   3e-06
ref|XP_002306863.1| GRAS family transcription factor [Populus tr...    55   4e-06

>ref|XP_002302035.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222843761|gb|EEE81308.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 512

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 56/171 (32%), Positives = 78/171 (45%), Gaps = 42/171 (24%)
 Frame = +2

Query: 8   MRSSLEV-HGELDLIQLNEPWDCNNLMGGYLQASHHYHTG-----------GDLSEFMDH 151
           M+ + E+ HG LDLIQ +EPWD     G     S+ +               +LSE+++H
Sbjct: 1   MKGAYEMAHGALDLIQPHEPWDHCASAGFPAPISNPFPKPVIENRCVNLERNELSEWVEH 60

Query: 152 VVKQLSDTSPAAATLDSFTIEPLSPHVDH-----------RPRKVLQR---DNN------ 271
           V KQL D  P   T DS   +    + D+           RP+K ++R   D N      
Sbjct: 61  VTKQLIDDVPDTETHDSLQTDTRMVYGDNNIVPSLLGDHFRPKKSMRRSYFDGNGEELQW 120

Query: 272 ----------IDVTTSTNNNNNKRLDQNTEDKGLRMITLLLECAVAISVDN 394
                     I     +  ++  R+D+N    GL +ITLLLECAVAISVDN
Sbjct: 121 SHELGEHQASISEKEGSARSSMSRIDEN----GLNLITLLLECAVAISVDN 167


>emb|CAN60709.1| hypothetical protein VITISV_027284 [Vitis vinifera]
          Length = 487

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 52/140 (37%), Positives = 68/140 (48%), Gaps = 17/140 (12%)
 Frame = +2

Query: 26  VHGELDLIQLNEPWDCNNLMGGYLQASHHYHTG-----------GDLSEFMDHVVKQLSD 172
           VHG LDLIQ +E W+ N ++G    +S ++               +LSE+++HV KQL +
Sbjct: 8   VHGALDLIQPHEQWEYN-IIGLQGASSSNFPKPMVVENRSNLERNELSEWVEHVTKQLIE 66

Query: 173 TSPAAATLDSFTIEPLSPHVDHRPRKVLQRDNNIDVTTSTN------NNNNKRLDQNTED 334
             P        T E         P  VLQ  N    + S N      N    RLD++   
Sbjct: 67  DLPETVGEGLKTEEVTIVGGSFAP--VLQWGNEAAGSQSNNLSTGDINGGLSRLDEH--- 121

Query: 335 KGLRMITLLLECAVAISVDN 394
            GL +ITLLLECAVAISVDN
Sbjct: 122 -GLGLITLLLECAVAISVDN 140


>ref|XP_002529844.1| DELLA protein GAIP, putative [Ricinus communis]
           gi|223530672|gb|EEF32545.1| DELLA protein GAIP, putative
           [Ricinus communis]
          Length = 519

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 42/165 (25%)
 Frame = +2

Query: 26  VHGELDLIQLNEPWDCNNLMGGYLQASHHYHTG--------GDLSEFMDHVVKQLSDTSP 181
           V+G +D++Q +E WD  + +G    A+ +             +LSE+++HV +QL D  P
Sbjct: 8   VNGAIDMMQTHEAWDYGSSVGFQAAAASNSFPKQVVTNLERNELSEWVEHVTRQLIDDMP 67

Query: 182 AAATLDSF---------------TIEPLSPHVDHRPRKVLQRDN---------------N 271
              +  S                 + P     D RPRK L+R +               N
Sbjct: 68  DTPSDHSLQTDTAMVCNEDSSNNNVVPSLLTSDSRPRKALKRSHFDGAYSIHEEELQWSN 127

Query: 272 ID----VTTSTNNNNNKRLDQNTEDKGLRMITLLLECAVAISVDN 394
           I+    +  + N  +N R     ++ GL +I+LL ECAVAISVDN
Sbjct: 128 IELGNQIRINENGASNGRGLSRIDEHGLNLISLLFECAVAISVDN 172


>ref|XP_002272465.2| PREDICTED: protein SCARECROW-like [Vitis vinifera]
          Length = 487

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 50/139 (35%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
 Frame = +2

Query: 26  VHGELDLIQLNEPWDCNNLMGGYLQASHHYHTG-----------GDLSEFMDHVVKQLSD 172
           VHG LDLIQ +E W+ N ++G    +S ++               +LSE+++HV KQL +
Sbjct: 8   VHGALDLIQPHEQWEYN-IIGLQGASSSNFPKPMVVENRSNLERNELSEWVEHVTKQLIE 66

Query: 173 TSPAAATLDSFTIEPLSPHVDHRPRKVLQRDNNIDVTTSTNNNNNKRLDQN-----TEDK 337
             P        T E         P  VLQ  N       + +NN    D N      ++ 
Sbjct: 67  DLPETVGEGLKTEEVTIVGGSFAP--VLQWGNE---AAGSQSNNLSTGDINGGLSRPDEH 121

Query: 338 GLRMITLLLECAVAISVDN 394
           GL +ITLLLECAVAISVDN
Sbjct: 122 GLGLITLLLECAVAISVDN 140


>ref|XP_002306863.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222856312|gb|EEE93859.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 519

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 44/167 (26%)
 Frame = +2

Query: 26  VHGELDLIQLNEPWDCNNLMGGYLQASHHYHTGG------------DLSEFMDHVVKQLS 169
           VHG L++IQ +E WD  ++ G     S+ +                +LSE+++HV KQL 
Sbjct: 8   VHGALNMIQPHETWDYASV-GFPAPISNPFPKPAVIENRCLNLERNELSEWVEHVTKQLI 66

Query: 170 DTSPAAATLDSFTIEPLSPHV------------DHRPRKVLQRD---------------- 265
           D  P  AT    +++  +  V            + RP+K ++R                 
Sbjct: 67  DDLPDIATDHDESLQTDTTTVYGGNDIVSSLLGEFRPKKYMRRSYFDGNGEELQWSHELG 126

Query: 266 ----NNIDVTTSTNNNNNKRLDQNTEDKGLRMITLLLECAVAISVDN 394
               N  +   ST + +  R+D+N    GL +ITLLLECAVAISVDN
Sbjct: 127 VHQTNISEKEGSTRSPSMSRIDEN----GLSLITLLLECAVAISVDN 169