BLASTX nr result

ID: Dioscorea21_contig00028220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028220
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001049619.1| Os03g0260600 [Oryza sativa Japonica Group] g...   123   1e-26
ref|XP_003558309.1| PREDICTED: transcription factor bHLH30-like ...   122   2e-26
tpg|DAA44489.1| TPA: hypothetical protein ZEAMMB73_701880 [Zea m...   121   7e-26
emb|CBI27073.3| unnamed protein product [Vitis vinifera]              119   2e-25
ref|XP_002278697.1| PREDICTED: transcription factor bHLH30 [Viti...   119   2e-25

>ref|NP_001049619.1| Os03g0260600 [Oryza sativa Japonica Group]
           gi|108707285|gb|ABF95080.1| Helix-loop-helix DNA-binding
           domain containing protein, expressed [Oryza sativa
           Japonica Group] gi|113548090|dbj|BAF11533.1|
           Os03g0260600 [Oryza sativa Japonica Group]
           gi|125585667|gb|EAZ26331.1| hypothetical protein
           OsJ_10212 [Oryza sativa Japonica Group]
          Length = 409

 Score =  123 bits (309), Expect = 1e-26
 Identities = 71/140 (50%), Positives = 87/140 (62%), Gaps = 21/140 (15%)
 Frame = +2

Query: 2   VDAANDEDGKFIVKASLCCDDRTDLLPDXXXXXXXXXXXXXXXEITTLGGRVKNVLLITG 181
           VDA++DEDG+ +V+ASLCCDDRTDLLPD               EITTLGGRVKNVL++TG
Sbjct: 270 VDASSDEDGRLVVRASLCCDDRTDLLPDLIRALKALRLRALKAEITTLGGRVKNVLVVTG 329

Query: 182 EDDS--------------------CNQINQLSITSIQDALKAVMERAAAEETSSAGIGA- 298
           +D +                         Q ++ SIQDAL+AVMER A+    S G GA 
Sbjct: 330 DDSAAAAACAGTDGDGEQQEEAMQAPMSPQHTVASIQDALRAVMERTASATEESGGSGAG 389

Query: 299 GGIKRQRTNSLSSILEHRSI 358
           GG+KRQRT SLS+ILE+RSI
Sbjct: 390 GGLKRQRTTSLSAILENRSI 409


>ref|XP_003558309.1| PREDICTED: transcription factor bHLH30-like [Brachypodium
           distachyon]
          Length = 419

 Score =  122 bits (307), Expect = 2e-26
 Identities = 72/136 (52%), Positives = 87/136 (63%), Gaps = 17/136 (12%)
 Frame = +2

Query: 2   VDAANDEDGKFIVKASLCCDDRTDLLPDXXXXXXXXXXXXXXXEITTLGGRVKNVLLITG 181
           VDA++DEDG+ +V+ASLCCDDR DLLPD               EITTLGGRVKNVLL+T 
Sbjct: 285 VDASSDEDGRLLVRASLCCDDRADLLPDLIRALKALRLRALKAEITTLGGRVKNVLLVT- 343

Query: 182 EDDSCNQINQL---------------SITSIQDALKAVMERAA--AEETSSAGIGAGGIK 310
           ED SC+   Q                ++ SIQ+AL+AVMER A  A    S G G+GG+K
Sbjct: 344 EDHSCDHQQQQQQDDGDEPMPMSPQHAVASIQEALRAVMERTASSAPAEDSGGSGSGGLK 403

Query: 311 RQRTNSLSSILEHRSI 358
           RQRT SLS+ILE+RSI
Sbjct: 404 RQRTTSLSAILENRSI 419


>tpg|DAA44489.1| TPA: hypothetical protein ZEAMMB73_701880 [Zea mays]
          Length = 191

 Score =  121 bits (303), Expect = 7e-26
 Identities = 73/138 (52%), Positives = 87/138 (63%), Gaps = 19/138 (13%)
 Frame = +2

Query: 2   VDAANDEDGKFIVKASLCCDDRTDLLPDXXXXXXXXXXXXXXXEITTLGGRVKNVLLITG 181
           VDA +DEDG+ +V+ASLCCDDR DLLPD               EITTLGGRVKNVLLIT 
Sbjct: 54  VDAGSDEDGRLVVRASLCCDDRADLLPDLVRALKALRLRALKAEITTLGGRVKNVLLITA 113

Query: 182 EDDS-------------CNQINQLSITSIQDALKAVMER---AAAEETSSAGI---GAGG 304
           +DDS                  Q ++ SIQ+AL+AVMER   AAAEE+ +A     GA G
Sbjct: 114 DDDSSAHDGQREEEEEEAPMSPQRTVASIQEALRAVMERTASAAAEESGAAAASTGGAAG 173

Query: 305 IKRQRTNSLSSILEHRSI 358
           +KRQR  SLS+ILE+RSI
Sbjct: 174 LKRQRMTSLSAILENRSI 191


>emb|CBI27073.3| unnamed protein product [Vitis vinifera]
          Length = 316

 Score =  119 bits (299), Expect = 2e-25
 Identities = 68/125 (54%), Positives = 83/125 (66%), Gaps = 10/125 (8%)
 Frame = +2

Query: 14  NDEDGKFIVKASLCCDDRTDLLPDXXXXXXXXXXXXXXXEITTLGGRVKNVLLITGEDDS 193
           +DEDGKF++KASLCC+DRTDLLPD               EITTLGGRVKNVL ITGE+DS
Sbjct: 199 SDEDGKFVIKASLCCEDRTDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLFITGEEDS 258

Query: 194 CN----------QINQLSITSIQDALKAVMERAAAEETSSAGIGAGGIKRQRTNSLSSIL 343
            +          Q  Q SI+SIQ+ALKAVME+   +E+SS     G +KRQRTN   +I+
Sbjct: 259 SSSGENQQQQQQQQQQYSISSIQEALKAVMEKTGGDESSS-----GSVKRQRTN--INII 311

Query: 344 EHRSI 358
           EHRS+
Sbjct: 312 EHRSL 316


>ref|XP_002278697.1| PREDICTED: transcription factor bHLH30 [Vitis vinifera]
          Length = 349

 Score =  119 bits (299), Expect = 2e-25
 Identities = 68/125 (54%), Positives = 83/125 (66%), Gaps = 10/125 (8%)
 Frame = +2

Query: 14  NDEDGKFIVKASLCCDDRTDLLPDXXXXXXXXXXXXXXXEITTLGGRVKNVLLITGEDDS 193
           +DEDGKF++KASLCC+DRTDLLPD               EITTLGGRVKNVL ITGE+DS
Sbjct: 232 SDEDGKFVIKASLCCEDRTDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLFITGEEDS 291

Query: 194 CN----------QINQLSITSIQDALKAVMERAAAEETSSAGIGAGGIKRQRTNSLSSIL 343
            +          Q  Q SI+SIQ+ALKAVME+   +E+SS     G +KRQRTN   +I+
Sbjct: 292 SSSGENQQQQQQQQQQYSISSIQEALKAVMEKTGGDESSS-----GSVKRQRTN--INII 344

Query: 344 EHRSI 358
           EHRS+
Sbjct: 345 EHRSL 349


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