BLASTX nr result

ID: Dioscorea21_contig00028179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028179
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282264.2| PREDICTED: CST complex subunit CTC1-like [Vi...   107   1e-21
gb|AFP73234.1| CST complex subunit CTC1-like protein, partial [C...   100   9e-20
ref|XP_004160622.1| PREDICTED: CST complex subunit CTC1-like [Cu...    95   7e-18
ref|XP_004141370.1| PREDICTED: CST complex subunit CTC1-like [Cu...    95   7e-18
ref|NP_001063041.1| Os09g0376000 [Oryza sativa Japonica Group] g...    95   7e-18

>ref|XP_002282264.2| PREDICTED: CST complex subunit CTC1-like [Vitis vinifera]
          Length = 1215

 Score =  107 bits (266), Expect = 1e-21
 Identities = 58/127 (45%), Positives = 78/127 (61%), Gaps = 1/127 (0%)
 Frame = -3

Query: 390 PVMAKLIGKVILVSGLXXXXXXXXXVRSYLMFVTTEKTNVSLCEVALSMMVSR-VVRPVK 214
           P+  KLIG VI +S L           S LM+VTT KT + +  +A   +  +  V    
Sbjct: 289 PLFTKLIGNVICISHLKKKLVFIGKEESQLMYVTTGKTVLRVLSMANQELPHKEAVIKGM 348

Query: 213 NHERVYCGVVTGIYMQGMAVELDEKVWLMITDPLLGLHHSLRVGALVHVMNCHLVCPEFS 34
               +Y G++TGIYMQGM + LDE+VWL+ITD LL   HSLRVGAL+ V N H + P+FS
Sbjct: 349 GECGLYSGIITGIYMQGMVINLDERVWLLITDRLLNPPHSLRVGALISVRNIHFLNPKFS 408

Query: 33  WTKILLL 13
           WT++L+L
Sbjct: 409 WTEMLIL 415


>gb|AFP73234.1| CST complex subunit CTC1-like protein, partial [Carica papaya]
          Length = 409

 Score =  100 bits (250), Expect = 9e-20
 Identities = 54/127 (42%), Positives = 75/127 (59%), Gaps = 1/127 (0%)
 Frame = -3

Query: 390 PVMAKLIGKVILVSGLXXXXXXXXXVRSYLMFVTTEKTNVSL-CEVALSMMVSRVVRPVK 214
           PV+ KL+G V+L+S L           S LMFVTTE + + L       +     V   K
Sbjct: 265 PVITKLVGGVVLLSRLKKKLIFMGKDESQLMFVTTENSILHLPSSFKKRLPYLETVVKGK 324

Query: 213 NHERVYCGVVTGIYMQGMAVELDEKVWLMITDPLLGLHHSLRVGALVHVMNCHLVCPEFS 34
                Y G++ G+YM+GM +ELD++ WL+++D  L   HSLRVGA+V V N H V P+FS
Sbjct: 325 GESSNYTGIIKGVYMEGMVIELDKEAWLLLSDRFLIPPHSLRVGAVVSVRNVHFVKPKFS 384

Query: 33  WTKILLL 13
           WTK+L+L
Sbjct: 385 WTKVLIL 391


>ref|XP_004160622.1| PREDICTED: CST complex subunit CTC1-like [Cucumis sativus]
          Length = 1362

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 52/130 (40%), Positives = 77/130 (59%), Gaps = 2/130 (1%)
 Frame = -3

Query: 390 PVMAKLIGK-VILVSGLXXXXXXXXXVRSYLMFVTTEKTNVSLCEVALSMM-VSRVVRPV 217
           PV++K +G   I   GL           S LM+VT+EK+++ L  ++ + +   + V   
Sbjct: 275 PVLSKFVGLGFINFWGLKKKLVSIGKAESCLMYVTSEKSSLHLSRLSRTRLPCKKSVIKG 334

Query: 216 KNHERVYCGVVTGIYMQGMAVELDEKVWLMITDPLLGLHHSLRVGALVHVMNCHLVCPEF 37
           K     Y G++ G+YMQGM VELD +VW+++TD  L   HS+RVGA++ V N H V P F
Sbjct: 335 KGECGSYTGIIKGVYMQGMLVELDNEVWVLLTDHFLSPPHSIRVGAIISVRNAHFVNPRF 394

Query: 36  SWTKILLLET 7
            W+K+LLL T
Sbjct: 395 PWSKLLLLGT 404


>ref|XP_004141370.1| PREDICTED: CST complex subunit CTC1-like [Cucumis sativus]
          Length = 1383

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 52/130 (40%), Positives = 77/130 (59%), Gaps = 2/130 (1%)
 Frame = -3

Query: 390 PVMAKLIGK-VILVSGLXXXXXXXXXVRSYLMFVTTEKTNVSLCEVALSMM-VSRVVRPV 217
           PV++K +G   I   GL           S LM+VT+EK+++ L  ++ + +   + V   
Sbjct: 275 PVLSKFVGLGFINFWGLKKKLVSIGKAESCLMYVTSEKSSLHLSRLSRTRLPCKKSVIKG 334

Query: 216 KNHERVYCGVVTGIYMQGMAVELDEKVWLMITDPLLGLHHSLRVGALVHVMNCHLVCPEF 37
           K     Y G++ G+YMQGM VELD +VW+++TD  L   HS+RVGA++ V N H V P F
Sbjct: 335 KGECGSYTGIIKGVYMQGMLVELDNEVWVLLTDHFLSPPHSIRVGAIISVRNAHFVNPRF 394

Query: 36  SWTKILLLET 7
            W+K+LLL T
Sbjct: 395 PWSKLLLLGT 404


>ref|NP_001063041.1| Os09g0376000 [Oryza sativa Japonica Group]
           gi|49387691|dbj|BAD26037.1| unknown protein [Oryza
           sativa Japonica Group] gi|49389036|dbj|BAD26276.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|113631274|dbj|BAF24955.1| Os09g0376000 [Oryza sativa
           Japonica Group]
          Length = 459

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 54/130 (41%), Positives = 77/130 (59%)
 Frame = -3

Query: 390 PVMAKLIGKVILVSGLXXXXXXXXXVRSYLMFVTTEKTNVSLCEVALSMMVSRVVRPVKN 211
           PV+A+++G+ + VSGL           SY M V+T KT +  C    +++  ++     +
Sbjct: 253 PVLARMVGRPVSVSGLKKRLVSIDRKGSYTMLVSTRKTMLRWCPSYPAVL--KLDGSPGD 310

Query: 210 HERVYCGVVTGIYMQGMAVELDEKVWLMITDPLLGLHHSLRVGALVHVMNCHLVCPEFSW 31
              VY GVVTGIYMQ M +ELD+ VWL+I D  L   HSLRVGA++ V N   +C + +W
Sbjct: 311 CGGVYTGVVTGIYMQRMLIELDKIVWLLIDDQHLAPSHSLRVGAVISVKNGRAICLKLAW 370

Query: 30  TKILLLETGI 1
           T+ LLL T I
Sbjct: 371 TRTLLLGTCI 380


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