BLASTX nr result

ID: Dioscorea21_contig00028133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028133
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304728.1| multidrug resistance protein ABC transporter...   108   5e-22
dbj|BAD72522.1| putative multidrug resistance-associated protein...    93   2e-17
ref|XP_003637285.1| ABC transporter C family member [Medicago tr...    91   1e-16
gb|ADP06402.1| MRP1 ABC transporter [Catharanthus roseus]              81   1e-13
emb|CAO94660.1| Multidrug Resistance associated Protein 1 [Catha...    81   1e-13

>ref|XP_002304728.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222842160|gb|EEE79707.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1426

 Score =  108 bits (270), Expect = 5e-22
 Identities = 52/136 (38%), Positives = 76/136 (55%)
 Frame = -1

Query: 413 YHEWFYRSSQLASWMSIMLVSKFSCWFPLLCNPFFCCWWIVKPITGIPRLYTTFSSLKTI 234
           YHEW +RSSQL  W  I++ S  +C   + CN F C WWI+K + GI  L+  F S++ +
Sbjct: 43  YHEWLFRSSQLIVWTVIIISSMCACLHDVFCNRFLCFWWIMKSLLGILHLHRAFGSMEVV 102

Query: 233 TCFKESSSVTAEILFTLFINITRIAKAPTEESKYDLLEGPLLSYDTKEEHHVSDPVTRAA 54
            C K+S  V  +++F + INI RI +A  + S    +E PLLS DT  E         A 
Sbjct: 103 KCLKDSCVVLLDVMFGISINIIRIKRASPKSSS---MEDPLLSVDTDIEEGFHGDSGNAK 159

Query: 53  QYWHMLTFQFVNPMMS 6
            YW  +TF+ +  +M+
Sbjct: 160 SYWDHMTFRTITSVMN 175


>dbj|BAD72522.1| putative multidrug resistance-associated protein 7 [Oryza sativa
           Japonica Group]
          Length = 1337

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 53/143 (37%), Positives = 78/143 (54%)
 Frame = -1

Query: 431 GKSMPEYHEWFYRSSQLASWMSIMLVSKFSCWFPLLCNPFFCCWWIVKPITGIPRLYTTF 252
           GK +  Y E F+RSSQ   WM + LVS    WF +  NP  C  WI+K +  IP L    
Sbjct: 34  GKDVVNY-ESFFRSSQFLVWMVVGLVSVHGPWF-VFYNPIMCFCWILKILLEIPHLQYKL 91

Query: 251 SSLKTITCFKESSSVTAEILFTLFINITRIAKAPTEESKYDLLEGPLLSYDTKEEHHVSD 72
           + LK +  FKE  S +  I+F LF+ ++ +   P  + + + +E PL+  D K E  V++
Sbjct: 92  TVLKAVLYFKEIISFSMAIVFGLFVVVSTVVDQPHNKREMNSIEDPLVPDDEKAEAEVTN 151

Query: 71  PVTRAAQYWHMLTFQFVNPMMSL 3
            +      W +LTF+FVNPMM +
Sbjct: 152 -LENNQSIWELLTFKFVNPMMDI 173


>ref|XP_003637285.1| ABC transporter C family member [Medicago truncatula]
           gi|355503220|gb|AES84423.1| ABC transporter C family
           member [Medicago truncatula]
          Length = 1539

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 47/136 (34%), Positives = 71/136 (52%)
 Frame = -1

Query: 413 YHEWFYRSSQLASWMSIMLVSKFSCWFPLLCNPFFCCWWIVKPITGIPRLYTTFSSLKTI 234
           YH W +  S+L  W +I+L +K +    ++ N   C WWI+ PI GI  L T F SL+  
Sbjct: 112 YHRWLHSCSELLVWANIILFTKCASIHCIVFNRVLCFWWILNPILGIFHLITNFPSLEVS 171

Query: 233 TCFKESSSVTAEILFTLFINITRIAKAPTEESKYDLLEGPLLSYDTKEEHHVSDPVTRAA 54
            C  ES  V   + F + IN+ R+ +     SK  LLE PLLS     E   +  +    
Sbjct: 172 ACIMESLVVLMNLSFGVVINVIRLKRL---SSKSSLLEDPLLSNGGDLEEGGNHDLENNC 228

Query: 53  QYWHMLTFQFVNPMMS 6
            +W  +TF+F++P+M+
Sbjct: 229 NFWDFMTFKFISPVMN 244


>gb|ADP06402.1| MRP1 ABC transporter [Catharanthus roseus]
          Length = 296

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/135 (30%), Positives = 67/135 (49%)
 Frame = -1

Query: 413 YHEWFYRSSQLASWMSIMLVSKFSCWFPLLCNPFFCCWWIVKPITGIPRLYTTFSSLKTI 234
           + E+ +  S    W++++LVS    WF + CN   C WWI+KP   IP L   F+S + +
Sbjct: 95  FQEYLFPGSLFGVWVTVLLVSICDYWFVIFCNRLLCLWWIIKPFLWIPHLQVVFTSQELL 154

Query: 233 TCFKESSSVTAEILFTLFINITRIAKAPTEESKYDLLEGPLLSYDTKEEHHVSDPVTRAA 54
            C  ES     +  F + INI + +K  +  S  D +E PLL      + H    +  A 
Sbjct: 155 PCLGESFLAFLDFTFGILINIIK-SKWASHRSSCDSIEEPLLPCKVDAKGHCG-ILGLAN 212

Query: 53  QYWHMLTFQFVNPMM 9
             W ++TF+ ++ +M
Sbjct: 213 NLWRIITFKSIDSVM 227


>emb|CAO94660.1| Multidrug Resistance associated Protein 1 [Catharanthus roseus]
          Length = 1457

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/135 (30%), Positives = 67/135 (49%)
 Frame = -1

Query: 413 YHEWFYRSSQLASWMSIMLVSKFSCWFPLLCNPFFCCWWIVKPITGIPRLYTTFSSLKTI 234
           + E+ +  S    W++++LVS    WF + CN   C WWI+KP   IP L   F+S + +
Sbjct: 95  FQEYLFPGSLFGVWVTVLLVSICDYWFVIFCNRLLCLWWIIKPFLWIPHLQVVFTSQELL 154

Query: 233 TCFKESSSVTAEILFTLFINITRIAKAPTEESKYDLLEGPLLSYDTKEEHHVSDPVTRAA 54
            C  ES     +  F + INI + +K  +  S  D +E PLL      + H    +  A 
Sbjct: 155 PCLGESFLAFLDFTFGILINIIK-SKWASHRSSCDSIEEPLLPCKVDAKGHCG-ILGLAN 212

Query: 53  QYWHMLTFQFVNPMM 9
             W ++TF+ ++ +M
Sbjct: 213 NLWRIITFKSIDSVM 227


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