BLASTX nr result

ID: Dioscorea21_contig00028117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028117
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001169345.1| uncharacterized protein LOC100383212 [Zea ma...    60   1e-07
ref|NP_001169495.1| uncharacterized protein LOC100383368 [Zea ma...    60   3e-07
ref|XP_002459892.1| hypothetical protein SORBIDRAFT_02g013160 [S...    59   4e-07
emb|CBI28248.3| unnamed protein product [Vitis vinifera]               59   6e-07
ref|XP_002282408.1| PREDICTED: CCR4-NOT transcription complex su...    59   6e-07

>ref|NP_001169345.1| uncharacterized protein LOC100383212 [Zea mays]
           gi|224028843|gb|ACN33497.1| unknown [Zea mays]
           gi|414588949|tpg|DAA39520.1| TPA: hypothetical protein
           ZEAMMB73_098635 [Zea mays]
          Length = 831

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/43 (60%), Positives = 39/43 (90%)
 Frame = +3

Query: 3   VTKALSHVPNNPRAILAAIYVDLLRGKTQNALVKLKQSRHVRF 131
           V++ L+ +PNNPRA+LA++YVDLL+GK+Q A+VKL++ R+VRF
Sbjct: 769 VSRGLAMLPNNPRAVLASVYVDLLQGKSQEAVVKLRRCRNVRF 811


>ref|NP_001169495.1| uncharacterized protein LOC100383368 [Zea mays]
           gi|224029669|gb|ACN33910.1| unknown [Zea mays]
           gi|414884727|tpg|DAA60741.1| TPA: hypothetical protein
           ZEAMMB73_688350 [Zea mays]
          Length = 617

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 25/43 (58%), Positives = 38/43 (88%)
 Frame = +3

Query: 3   VTKALSHVPNNPRAILAAIYVDLLRGKTQNALVKLKQSRHVRF 131
           V++ L+ +PNNPRA+LA++Y+DLL+GK+Q A+VKL+  R+VRF
Sbjct: 566 VSRGLAMLPNNPRAVLASVYIDLLQGKSQEAVVKLRHCRNVRF 608


>ref|XP_002459892.1| hypothetical protein SORBIDRAFT_02g013160 [Sorghum bicolor]
           gi|241923269|gb|EER96413.1| hypothetical protein
           SORBIDRAFT_02g013160 [Sorghum bicolor]
          Length = 825

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 25/43 (58%), Positives = 38/43 (88%)
 Frame = +3

Query: 3   VTKALSHVPNNPRAILAAIYVDLLRGKTQNALVKLKQSRHVRF 131
           V++ L+ +PNNPRA+LA++Y+DLL+GK+Q A+ KL+Q R+VRF
Sbjct: 774 VSRGLAMLPNNPRAVLASVYIDLLQGKSQEAVGKLRQCRNVRF 816


>emb|CBI28248.3| unnamed protein product [Vitis vinifera]
          Length = 812

 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 28/47 (59%), Positives = 35/47 (74%)
 Frame = +3

Query: 3   VTKALSHVPNNPRAILAAIYVDLLRGKTQNALVKLKQSRHVRFYSST 143
           V +ALS +PN+   IL A+YVDL+ GKTQ AL KLKQ  HVRF +S+
Sbjct: 759 VKQALSIIPNSSEVILTAVYVDLVHGKTQEALAKLKQCSHVRFLASS 805


>ref|XP_002282408.1| PREDICTED: CCR4-NOT transcription complex subunit 10-like [Vitis
           vinifera]
          Length = 857

 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 28/47 (59%), Positives = 35/47 (74%)
 Frame = +3

Query: 3   VTKALSHVPNNPRAILAAIYVDLLRGKTQNALVKLKQSRHVRFYSST 143
           V +ALS +PN+   IL A+YVDL+ GKTQ AL KLKQ  HVRF +S+
Sbjct: 804 VKQALSIIPNSSEVILTAVYVDLVHGKTQEALAKLKQCSHVRFLASS 850


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