BLASTX nr result

ID: Dioscorea21_contig00028081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028081
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265446.1| PREDICTED: uncharacterized protein LOC100256...    77   2e-12
emb|CAN60849.1| hypothetical protein VITISV_023571 [Vitis vinife...    77   2e-12
ref|XP_004163013.1| PREDICTED: uncharacterized protein LOC101228...    70   3e-10
ref|XP_004149675.1| PREDICTED: uncharacterized protein LOC101205...    70   3e-10
gb|AAM65300.1| unknown [Arabidopsis thaliana]                          69   6e-10

>ref|XP_002265446.1| PREDICTED: uncharacterized protein LOC100256672 [Vitis vinifera]
          Length = 277

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 48/105 (45%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
 Frame = -2

Query: 312 MASCLPGRMKTLKRKELDDVSDGFSEFSLLSPSIKMRRLDVELPSVMQEEP-AVPLVSQQ 136
           MAS L  +MK   RKEL++V+D FS+FSL SP+ K+RRLD ELP +M+EE   VP+  +Q
Sbjct: 1   MASYLSLKMK---RKELEEVNDDFSDFSLSSPARKIRRLDAELPPIMEEEEHDVPVEFEQ 57

Query: 135 QLLSEQIGSXXXXXXXXXXXXPLIPVNEERAIVLYKPIDTPFYLS 1
            L  +Q+ +              IP+N ERAIVL+KP+++P   S
Sbjct: 58  LLPEKQVENTREEVDG-------IPLNAERAIVLFKPVNSPLMQS 95


>emb|CAN60849.1| hypothetical protein VITISV_023571 [Vitis vinifera]
           gi|296090470|emb|CBI40666.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 48/105 (45%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
 Frame = -2

Query: 312 MASCLPGRMKTLKRKELDDVSDGFSEFSLLSPSIKMRRLDVELPSVMQEEP-AVPLVSQQ 136
           MAS L  +MK   RKEL++V+D FS+FSL SP+ K+RRLD ELP +M+EE   VP+  +Q
Sbjct: 1   MASYLSLKMK---RKELEEVNDDFSDFSLSSPARKIRRLDAELPPIMEEEEHDVPVEFEQ 57

Query: 135 QLLSEQIGSXXXXXXXXXXXXPLIPVNEERAIVLYKPIDTPFYLS 1
            L  +Q+ +              IP+N ERAIVL+KP+++P   S
Sbjct: 58  LLPEKQVENTREEVDG-------IPLNAERAIVLFKPVNSPLMQS 95


>ref|XP_004163013.1| PREDICTED: uncharacterized protein LOC101228135 [Cucumis sativus]
          Length = 249

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 15/108 (13%)
 Frame = -2

Query: 279 LKRKELDDVSDGFSEFSLLSPSIKMRRLDVELPSVMQEE--PAVPLVSQQQLLSEQ--IG 112
           +KRK+LD ++D FS+FSL SP+ K+RRLDV LP +++EE  P   ++S+Q L+ E   +G
Sbjct: 5   MKRKDLDQINDDFSDFSLSSPARKIRRLDVGLPPIIEEEEPPEFSVLSKQPLIPEDFTVG 64

Query: 111 SXXXXXXXXXXXXPLIPV-----------NEERAIVLYKPIDTPFYLS 1
                         + P            N+ERAIVL+KP++T F+ S
Sbjct: 65  GNGVRIEELSDASSVSPSVYAMEDRPFCDNQERAIVLFKPVNTSFFQS 112


>ref|XP_004149675.1| PREDICTED: uncharacterized protein LOC101205533 [Cucumis sativus]
          Length = 249

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 15/108 (13%)
 Frame = -2

Query: 279 LKRKELDDVSDGFSEFSLLSPSIKMRRLDVELPSVMQEE--PAVPLVSQQQLLSEQ--IG 112
           +KRK+LD ++D FS+FSL SP+ K+RRLDV LP +++EE  P   ++S+Q L+ E   +G
Sbjct: 5   MKRKDLDQINDDFSDFSLSSPARKIRRLDVGLPPIIEEEEPPEFSVLSKQPLIPEDFTVG 64

Query: 111 SXXXXXXXXXXXXPLIPV-----------NEERAIVLYKPIDTPFYLS 1
                         + P            N+ERAIVL+KP++T F+ S
Sbjct: 65  GNGVRIEELSDASSVSPSVYAMEDRPFCDNQERAIVLFKPVNTSFFQS 112


>gb|AAM65300.1| unknown [Arabidopsis thaliana]
          Length = 225

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 39/87 (44%), Positives = 57/87 (65%)
 Frame = -2

Query: 282 TLKRKELDDVSDGFSEFSLLSPSIKMRRLDVELPSVMQEEPAVPLVSQQQLLSEQIGSXX 103
           ++KRK++D V+D FS+FSL SP+ K+RRLDV+LP +M+EE     +  Q  ++E+I    
Sbjct: 8   SMKRKDIDRVNDDFSDFSLSSPARKIRRLDVDLPPIMEEEEID--LPMQDTVAEEI---- 61

Query: 102 XXXXXXXXXXPLIPVNEERAIVLYKPI 22
                      L PVN+ERAIVL+KP+
Sbjct: 62  ----------ELEPVNDERAIVLFKPL 78


Top