BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028065
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628741.1| Pentatricopeptide repeat-containing protein ...    92   3e-17
ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containi...    90   2e-16
ref|XP_002533966.1| pentatricopeptide repeat-containing protein,...    85   5e-15
ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containi...    76   3e-12
emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]    71   1e-10

>ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355522763|gb|AET03217.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 758

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 42/91 (46%), Positives = 62/91 (68%)
 Frame = -1

Query: 287 QRQIEERFISLVQSCRNLEKLHQIQAQTITHGFFQSPFLAPKIIIAFFQFQKPNLALQSF 108
           QR +EE+FI+L++SC+N E+LHQIQAQ +THG   + F+AP  I    +F++ + A + F
Sbjct: 8   QRIVEEKFITLLRSCKNYERLHQIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLF 67

Query: 107 QQIQQPNAVLWNVMFKGYTEIELHAETLQLF 15
            +I QPN   WN MF+GY +   H +T+ LF
Sbjct: 68  DKIPQPNTATWNAMFRGYLQNGHHRDTVVLF 98


>ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 623

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 47/109 (43%), Positives = 66/109 (60%)
 Frame = -1

Query: 329 SKSIASLAPKLLQTQRQIEERFISLVQSCRNLEKLHQIQAQTITHGFFQSPFLAPKIIIA 150
           S  I  LAPK     R +EERFISL+QSC+  +++HQIQAQ I +GF  + ++ PK++  
Sbjct: 22  STEIDYLAPK--PPHRLLEERFISLLQSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTI 79

Query: 149 FFQFQKPNLALQSFQQIQQPNAVLWNVMFKGYTEIELHAETLQLFVCMR 3
               ++   A Q F QI  PN  LWN MF+GY + E + E + LF  M+
Sbjct: 80  CATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMK 128


>ref|XP_002533966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526049|gb|EEF28413.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 515

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/105 (41%), Positives = 64/105 (60%)
 Frame = -1

Query: 329 SKSIASLAPKLLQTQRQIEERFISLVQSCRNLEKLHQIQAQTITHGFFQSPFLAPKIIIA 150
           +K  ++L+PKL    R +EE+ ISL+ SC+ L  LHQIQ+  I HG   + ++ PKII +
Sbjct: 50  AKFASTLSPKL--PHRLLEEKIISLLYSCKTLNHLHQIQSHIINHGLQFNDYITPKIITS 107

Query: 149 FFQFQKPNLALQSFQQIQQPNAVLWNVMFKGYTEIELHAETLQLF 15
           F  F++   A + F QI +PN   WN M KGY+  + H E + LF
Sbjct: 108 FALFKRMRHAHKLFDQIPEPNVSNWNAMLKGYSLNDSHREVIVLF 152


>ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 619

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/93 (37%), Positives = 53/93 (56%)
 Frame = -1

Query: 284 RQIEERFISLVQSCRNLEKLHQIQAQTITHGFFQSPFLAPKIIIAFFQFQKPNLALQSFQ 105
           R +E++FISL+++C    +LHQIQAQ +THG   + ++ P  I A  +      A + F 
Sbjct: 19  RVVEDKFISLLRTCGTCVRLHQIQAQIVTHGLEGNDYVTPSFITACARLGGIRRARRVFD 78

Query: 104 QIQQPNAVLWNVMFKGYTEIELHAETLQLFVCM 6
           +  QPN   WN MF+GY +   H + + LF  M
Sbjct: 79  KTAQPNGATWNAMFRGYAQANCHLDVVVLFARM 111


>emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
          Length = 686

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/84 (38%), Positives = 51/84 (60%)
 Frame = -1

Query: 254 VQSCRNLEKLHQIQAQTITHGFFQSPFLAPKIIIAFFQFQKPNLALQSFQQIQQPNAVLW 75
           ++SC+  +++HQIQAQ I +GF  + ++ PK++      ++   A Q F QI  PN  LW
Sbjct: 108 MRSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALW 167

Query: 74  NVMFKGYTEIELHAETLQLFVCMR 3
           N MF+GY + E + E + LF  M+
Sbjct: 168 NSMFRGYAQSESYREVVFLFFQMK 191