BLASTX nr result

ID: Dioscorea21_contig00028023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028023
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003567340.1| PREDICTED: pentatricopeptide repeat-containi...    70   1e-10
gb|AAF32491.1|AF091837_1 DNA-binding protein [Triticum aestivum]       68   7e-10
ref|NP_001066267.1| Os12g0170100 [Oryza sativa Japonica Group] g...    64   2e-08
gb|EAY82409.1| hypothetical protein OsI_37623 [Oryza sativa Indi...    62   4e-08
gb|EAY73527.1| hypothetical protein OsI_01409 [Oryza sativa Indi...    62   6e-08

>ref|XP_003567340.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Brachypodium distachyon]
          Length = 612

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 44/99 (44%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
 Frame = -3

Query: 295 SSDSENDVEEGFSDLEVPPETDKVGDSSDDLEDGISEDEL-SVEGKDEDADHARGLLDA- 122
           S D E D+E+GFSDLEVPPE DK             + EL S E  DEDA  A  LL+  
Sbjct: 82  SGDKEEDLEDGFSDLEVPPEADK------------KDAELTSEESSDEDAADAVDLLEVD 129

Query: 121 AKDTNVEKALNKKIGTSPLFKILMEAPRLSINSALDKWV 5
             D+  EK   KKI   PL K+++EAP   ++  L KWV
Sbjct: 130 DADSKSEKEPKKKISQCPLLKVMLEAPWNDVSGTLKKWV 168


>gb|AAF32491.1|AF091837_1 DNA-binding protein [Triticum aestivum]
          Length = 612

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 40/99 (40%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
 Frame = -3

Query: 295 SSDSENDVEEGFSDLEVPPETDKVGDSSDDLEDGISEDEL-SVEGKDEDADHARGLLDAA 119
           S D  +D+E+GFSDLEVPPE DK             + EL S E  D+DA    GL    
Sbjct: 83  SGDKVDDLEDGFSDLEVPPEADK------------KDVELPSEESSDDDAVDGIGLSGDD 130

Query: 118 KDTNVEKALNKKIGTSPLFKILMEAPRLSINSALDKWVE 2
            D   +K   KK   SPL K+++EAPR  ++  L KW++
Sbjct: 131 ADAKPDKEPMKKASQSPLLKVMLEAPRNGVSGTLKKWLD 169


>ref|NP_001066267.1| Os12g0170100 [Oryza sativa Japonica Group]
           gi|77553759|gb|ABA96555.1| DNA-binding protein,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113648774|dbj|BAF29286.1| Os12g0170100 [Oryza sativa
           Japonica Group] gi|125578643|gb|EAZ19789.1| hypothetical
           protein OsJ_35368 [Oryza sativa Japonica Group]
           gi|215767656|dbj|BAG99884.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 611

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 40/97 (41%), Positives = 52/97 (53%)
 Frame = -3

Query: 295 SSDSENDVEEGFSDLEVPPETDKVGDSSDDLEDGISEDELSVEGKDEDADHARGLLDAAK 116
           S D ++++EEGFSDLEVPPE  K      DL      D  S E  DED   A GL +   
Sbjct: 83  SGDKQDELEEGFSDLEVPPEAHK-----KDL------DLTSDESSDEDTIDAIGLSEVEA 131

Query: 115 DTNVEKALNKKIGTSPLFKILMEAPRLSINSALDKWV 5
           D   E+ + K    S L K L+E+PR+ +  AL KW+
Sbjct: 132 DAKPEEPIKK--SQSTLLKALLESPRVDVAGALKKWL 166


>gb|EAY82409.1| hypothetical protein OsI_37623 [Oryza sativa Indica Group]
          Length = 611

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 39/97 (40%), Positives = 52/97 (53%)
 Frame = -3

Query: 295 SSDSENDVEEGFSDLEVPPETDKVGDSSDDLEDGISEDELSVEGKDEDADHARGLLDAAK 116
           S D ++++EEGFSDL+VPPE  K      DL      D  S E  DED   A GL +   
Sbjct: 83  SGDKQDELEEGFSDLDVPPEAHK-----KDL------DLTSDESSDEDTIDAIGLSEVEA 131

Query: 115 DTNVEKALNKKIGTSPLFKILMEAPRLSINSALDKWV 5
           D   E+ + K    S L K L+E+PR+ +  AL KW+
Sbjct: 132 DAKPEEPIKK--SQSTLLKALLESPRVDVAGALKKWL 166


>gb|EAY73527.1| hypothetical protein OsI_01409 [Oryza sativa Indica Group]
          Length = 611

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 39/97 (40%), Positives = 51/97 (52%)
 Frame = -3

Query: 295 SSDSENDVEEGFSDLEVPPETDKVGDSSDDLEDGISEDELSVEGKDEDADHARGLLDAAK 116
           S D ++++EEGFSDLEVPPE DK      DL      D  S E  DED   A GL +   
Sbjct: 83  SGDKQDELEEGFSDLEVPPEADK-----KDL------DLTSDESSDEDTIDAIGLSEVEA 131

Query: 115 DTNVEKALNKKIGTSPLFKILMEAPRLSINSALDKWV 5
           D   E+ + K    S L K L+ +PR+ +  A  KW+
Sbjct: 132 DAKPEEPIKK--SQSTLLKALLVSPRVDVAGATKKWL 166


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