BLASTX nr result

ID: Dioscorea21_contig00028022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028022
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV42258.1| hypothetical protein [Beta vulgaris]                   159   3e-37
ref|XP_004153883.1| PREDICTED: uncharacterized protein LOC101208...   156   2e-36
gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]   156   2e-36
gb|ABM55240.1| retrotransposon protein [Beta vulgaris]                155   4e-36
gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]     152   2e-35

>gb|AEV42258.1| hypothetical protein [Beta vulgaris]
          Length = 1553

 Score =  159 bits (401), Expect = 3e-37
 Identities = 76/110 (69%), Positives = 85/110 (77%)
 Frame = +1

Query: 1   FSDVFPKDLPGLPPVREVEFPINLAPCTALLSKAPYRMAPAXXXXXXXXXXXXXXXGFIR 180
           F DVFP+++PG+PP R+VEF ++L P T  +SKA YRMAPA               G+IR
Sbjct: 563 FQDVFPEEIPGMPPRRDVEFTVDLVPGTGPISKATYRMAPAEMNELKNQLEELLDKGYIR 622

Query: 181 PSMSPWGAPVLFVKKKDGSLRLCIDYRELNKVTVKNKYPLPRIDDLMDQL 330
           PSMSPWGAPVLFVKKKDGSLRLCIDYRELN VTVKNKYPLPRIDDL DQL
Sbjct: 623 PSMSPWGAPVLFVKKKDGSLRLCIDYRELNNVTVKNKYPLPRIDDLFDQL 672


>ref|XP_004153883.1| PREDICTED: uncharacterized protein LOC101208523, partial [Cucumis
           sativus]
          Length = 804

 Score =  156 bits (394), Expect = 2e-36
 Identities = 74/110 (67%), Positives = 85/110 (77%)
 Frame = +1

Query: 1   FSDVFPKDLPGLPPVREVEFPINLAPCTALLSKAPYRMAPAXXXXXXXXXXXXXXXGFIR 180
           + DVFP+DLPGLPP RE++F I L P T  +S+APYRMAPA               GFI+
Sbjct: 584 YPDVFPEDLPGLPPHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKGFIQ 643

Query: 181 PSMSPWGAPVLFVKKKDGSLRLCIDYRELNKVTVKNKYPLPRIDDLMDQL 330
           PS+S WGAPVLFVKKKDGS+RLCIDYRELNKVT+KN+YPLPRIDDL DQL
Sbjct: 644 PSVSSWGAPVLFVKKKDGSMRLCIDYRELNKVTIKNRYPLPRIDDLFDQL 693


>gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]
          Length = 1475

 Score =  156 bits (394), Expect = 2e-36
 Identities = 74/110 (67%), Positives = 84/110 (76%)
 Frame = +1

Query: 1   FSDVFPKDLPGLPPVREVEFPINLAPCTALLSKAPYRMAPAXXXXXXXXXXXXXXXGFIR 180
           F DVFP DLPGLPP R+++FPI L P T  +S  PYRMAPA               GFIR
Sbjct: 647 FIDVFPTDLPGLPPERDIDFPIELEPGTRPISIPPYRMAPAELKELSVQLQDLLGKGFIR 706

Query: 181 PSMSPWGAPVLFVKKKDGSLRLCIDYRELNKVTVKNKYPLPRIDDLMDQL 330
           PS+SPWGAPVLFVKKKDG++R+CIDYR+LNKVTVKN+YPLPRIDDL DQL
Sbjct: 707 PSVSPWGAPVLFVKKKDGTMRMCIDYRQLNKVTVKNRYPLPRIDDLFDQL 756


>gb|ABM55240.1| retrotransposon protein [Beta vulgaris]
          Length = 1501

 Score =  155 bits (391), Expect = 4e-36
 Identities = 74/111 (66%), Positives = 83/111 (74%)
 Frame = +1

Query: 1   FSDVFPKDLPGLPPVREVEFPINLAPCTALLSKAPYRMAPAXXXXXXXXXXXXXXXGFIR 180
           F DVFP ++ G+PP R VEF I+L P TA +SKAPYRMAP                G+IR
Sbjct: 531 FMDVFPSEISGMPPARAVEFTIDLVPGTAPISKAPYRMAPPEMSELKTQLQELLDKGYIR 590

Query: 181 PSMSPWGAPVLFVKKKDGSLRLCIDYRELNKVTVKNKYPLPRIDDLMDQLH 333
           PS SPWGAPVLFVKKKDGS+RLCIDYRELN VT+KNKYPLPRIDDL DQL+
Sbjct: 591 PSASPWGAPVLFVKKKDGSMRLCIDYRELNNVTIKNKYPLPRIDDLFDQLN 641


>gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]
          Length = 1771

 Score =  152 bits (385), Expect = 2e-35
 Identities = 72/110 (65%), Positives = 85/110 (77%)
 Frame = +1

Query: 1    FSDVFPKDLPGLPPVREVEFPINLAPCTALLSKAPYRMAPAXXXXXXXXXXXXXXXGFIR 180
            F+DVFP DLPGLPP R+++F I+L P T  +S  PYRMAPA               GFIR
Sbjct: 821  FADVFPIDLPGLPPDRDIDFAIDLEPDTRPISIPPYRMAPAELRELSAQLEDLLGKGFIR 880

Query: 181  PSMSPWGAPVLFVKKKDGSLRLCIDYRELNKVTVKNKYPLPRIDDLMDQL 330
            PS+SPWGAPVLFVKKKDG++R+CIDYR+LNKVTVKN+YP+PRIDDL DQL
Sbjct: 881  PSVSPWGAPVLFVKKKDGTMRMCIDYRQLNKVTVKNRYPMPRIDDLFDQL 930


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