BLASTX nr result

ID: Dioscorea21_contig00028015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028015
         (1319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263666.2| PREDICTED: peptide chain release factor 1-li...   157   6e-36
ref|XP_002519400.1| peptide chain release factor, putative [Rici...   150   7e-34
ref|XP_002458885.1| hypothetical protein SORBIDRAFT_03g042170 [S...   148   3e-33
dbj|BAJ99965.1| predicted protein [Hordeum vulgare subsp. vulgare]    146   1e-32
gb|EAY76760.1| hypothetical protein OsI_04716 [Oryza sativa Indi...   146   1e-32

>ref|XP_002263666.2| PREDICTED: peptide chain release factor 1-like [Vitis vinifera]
           gi|297734721|emb|CBI16955.3| unnamed protein product
           [Vitis vinifera]
          Length = 224

 Score =  157 bits (397), Expect = 6e-36
 Identities = 83/126 (65%), Positives = 91/126 (72%)
 Frame = +2

Query: 326 AVEDRSQHKNXXXXXXXXXXXXXXKVRNDINLDEYKPPPEILQILPAKSTIRGADVGPQI 505
           AVEDRSQHKN              KVRN I+LD Y PP E+LQILPAKSTIR +D GPQI
Sbjct: 99  AVEDRSQHKNRASALARLRTLLALKVRNSIDLDTYSPPLELLQILPAKSTIRTSDCGPQI 158

Query: 506 GPNNPKFALGMQALLDLIFGVEGSVSEAAKRLGLSTGAXXXXXXXXXXXXMAVNQLRTSK 685
           GPNNPKFALGM ALLDLIF VEGS+S+AAK +GLSTGA            MAVN+LRTSK
Sbjct: 159 GPNNPKFALGMLALLDLIFAVEGSISDAAKLMGLSTGALSRLVLSDDSLRMAVNELRTSK 218

Query: 686 GMKPLK 703
           G+KPLK
Sbjct: 219 GLKPLK 224


>ref|XP_002519400.1| peptide chain release factor, putative [Ricinus communis]
           gi|223541467|gb|EEF43017.1| peptide chain release
           factor, putative [Ricinus communis]
          Length = 185

 Score =  150 bits (379), Expect = 7e-34
 Identities = 79/120 (65%), Positives = 85/120 (70%)
 Frame = +2

Query: 326 AVEDRSQHKNXXXXXXXXXXXXXXKVRNDINLDEYKPPPEILQILPAKSTIRGADVGPQI 505
           AVEDRSQHKN              KVRN + LD Y PPPE+LQILP KSTIRG+D GPQI
Sbjct: 39  AVEDRSQHKNRASALRRLRTLLALKVRNAVYLDAYSPPPELLQILPPKSTIRGSDCGPQI 98

Query: 506 GPNNPKFALGMQALLDLIFGVEGSVSEAAKRLGLSTGAXXXXXXXXXXXXMAVNQLRTSK 685
           GPNNPKF LGMQALLDL+F VEGSVSEAAK LGLSTGA            +AVN+LRTSK
Sbjct: 99  GPNNPKFVLGMQALLDLVFAVEGSVSEAAKFLGLSTGALSRLILSDDSLRLAVNELRTSK 158


>ref|XP_002458885.1| hypothetical protein SORBIDRAFT_03g042170 [Sorghum bicolor]
           gi|241930860|gb|EES04005.1| hypothetical protein
           SORBIDRAFT_03g042170 [Sorghum bicolor]
          Length = 259

 Score =  148 bits (373), Expect = 3e-33
 Identities = 77/126 (61%), Positives = 87/126 (69%)
 Frame = +2

Query: 326 AVEDRSQHKNXXXXXXXXXXXXXXKVRNDINLDEYKPPPEILQILPAKSTIRGADVGPQI 505
           AVEDRSQHKN              KVR  INLD+Y PP E+LQILP KST+RG DVGPQI
Sbjct: 134 AVEDRSQHKNRASALSRLRTLIALKVRRPINLDDYTPPVELLQILPLKSTVRGKDVGPQI 193

Query: 506 GPNNPKFALGMQALLDLIFGVEGSVSEAAKRLGLSTGAXXXXXXXXXXXXMAVNQLRTSK 685
           GPNN KF+ GMQALLDL+F VEGS+S+AAK LGLSTGA             A N+LR SK
Sbjct: 194 GPNNSKFSPGMQALLDLLFAVEGSISDAAKILGLSTGALSRLILSDDSLRTAANELRASK 253

Query: 686 GMKPLK 703
           G+KPL+
Sbjct: 254 GLKPLR 259


>dbj|BAJ99965.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 170

 Score =  146 bits (369), Expect = 1e-32
 Identities = 79/126 (62%), Positives = 85/126 (67%)
 Frame = +2

Query: 326 AVEDRSQHKNXXXXXXXXXXXXXXKVRNDINLDEYKPPPEILQILPAKSTIRGADVGPQI 505
           AVEDRSQHKN              KVR  INLD Y PP E+LQILP KSTIR  DVG QI
Sbjct: 45  AVEDRSQHKNRSSALSRLRTLIALKVRRPINLDNYTPPVELLQILPLKSTIRSKDVGNQI 104

Query: 506 GPNNPKFALGMQALLDLIFGVEGSVSEAAKRLGLSTGAXXXXXXXXXXXXMAVNQLRTSK 685
           GPNNPKF+ GMQALLDL+F VEGSVSEAAK LGLSTGA             A N+LR SK
Sbjct: 105 GPNNPKFSPGMQALLDLLFAVEGSVSEAAKVLGLSTGALSRLILSDDSLRAAANELRASK 164

Query: 686 GMKPLK 703
           G+KPL+
Sbjct: 165 GLKPLR 170


>gb|EAY76760.1| hypothetical protein OsI_04716 [Oryza sativa Indica Group]
          Length = 246

 Score =  146 bits (368), Expect = 1e-32
 Identities = 77/126 (61%), Positives = 86/126 (68%)
 Frame = +2

Query: 326 AVEDRSQHKNXXXXXXXXXXXXXXKVRNDINLDEYKPPPEILQILPAKSTIRGADVGPQI 505
           AVEDRSQH N              KVR  INL++Y PP E+LQILP KSTIRG D+GPQI
Sbjct: 121 AVEDRSQHMNRASALSRLRTLIALKVRKPINLEDYTPPVELLQILPLKSTIRGKDIGPQI 180

Query: 506 GPNNPKFALGMQALLDLIFGVEGSVSEAAKRLGLSTGAXXXXXXXXXXXXMAVNQLRTSK 685
           GPNN KFA GMQALLDL+F VEGSVSEAAK LGLSTGA             A N+LR +K
Sbjct: 181 GPNNSKFAPGMQALLDLLFAVEGSVSEAAKLLGLSTGAVSRLILSDDSLRAAANELRAAK 240

Query: 686 GMKPLK 703
           G+KPL+
Sbjct: 241 GLKPLR 246


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