BLASTX nr result
ID: Dioscorea21_contig00028002
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00028002 (518 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI28135.3| unnamed protein product [Vitis vinifera] 211 4e-53 ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containi... 211 4e-53 ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containi... 209 2e-52 ref|XP_002529344.1| pentatricopeptide repeat-containing protein,... 201 5e-50 gb|ACZ98537.1| PPR motif protein [Malus x domestica] 200 9e-50 >emb|CBI28135.3| unnamed protein product [Vitis vinifera] Length = 1974 Score = 211 bits (538), Expect = 4e-53 Identities = 102/171 (59%), Positives = 131/171 (76%) Frame = -2 Query: 517 VGLVEDAESVFDCIINRDVVTWNLLISSYVQDEQIEKAFHSCRLMRRENFKFDCVTLCSI 338 VGL+EDAE VF ++ +DVVTWNLLISSYVQ Q+ KA + C LMR EN +FD VTL SI Sbjct: 1426 VGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSI 1485 Query: 337 LTACVNDGKIELGRVGHGFCIRNNLDSDLLVMSAVIDLYSSCGKMELAQRVFDVAASRDL 158 L+A I+LG+ GH +CIR NL+SD++V +++ID+Y+ C +++ A++VFD RDL Sbjct: 1486 LSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDL 1545 Query: 157 VVWNTLIFAYAQYGLSGEALKHFYQMQLHGLHPNVVSWNSVILGLLQNRQV 5 V+WNTL+ AYAQ GLSGEALK FYQMQ + PNV+SWNSVILG L+N QV Sbjct: 1546 VLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQV 1596 Score = 102 bits (255), Expect = 2e-20 Identities = 58/161 (36%), Positives = 93/161 (57%) Frame = -2 Query: 514 GLVEDAESVFDCIINRDVVTWNLLISSYVQDEQIEKAFHSCRLMRRENFKFDCVTLCSIL 335 G++EDA VFD ++ ++VVTWN +I YVQ+ ++A MR E + VT+ S L Sbjct: 1326 GVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFL 1385 Query: 334 TACVNDGKIELGRVGHGFCIRNNLDSDLLVMSAVIDLYSSCGKMELAQRVFDVAASRDLV 155 +A N + G+ GH I N+LD D ++ S++I+ YS G +E A+ VF +D+V Sbjct: 1386 SASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVV 1445 Query: 154 VWNTLIFAYAQYGLSGEALKHFYQMQLHGLHPNVVSWNSVI 32 WN LI +Y Q+ G+AL + M+ L + V+ +S++ Sbjct: 1446 TWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSIL 1486 Score = 87.4 bits (215), Expect = 1e-15 Identities = 46/165 (27%), Positives = 91/165 (55%), Gaps = 4/165 (2%) Frame = -2 Query: 514 GLVEDAESVFDCI----INRDVVTWNLLISSYVQDEQIEKAFHSCRLMRRENFKFDCVTL 347 G V +A+ +F + +++TW LIS Q +A + M+ + ++ Sbjct: 1594 GQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASI 1653 Query: 346 CSILTACVNDGKIELGRVGHGFCIRNNLDSDLLVMSAVIDLYSSCGKMELAQRVFDVAAS 167 S+L AC + + GR HGF R+ + V ++++D+Y+ CG ++ A++VF + +S Sbjct: 1654 TSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSS 1713 Query: 166 RDLVVWNTLIFAYAQYGLSGEALKHFYQMQLHGLHPNVVSWNSVI 32 ++L ++N +I AYA +G + EAL F +Q G+ P+ +++ S++ Sbjct: 1714 KELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSIL 1758 Score = 82.0 bits (201), Expect = 4e-14 Identities = 46/153 (30%), Positives = 81/153 (52%) Frame = -2 Query: 505 EDAESVFDCIINRDVVTWNLLISSYVQDEQIEKAFHSCRLMRRENFKFDCVTLCSILTAC 326 E A +F + R+V +W ++ + E A M+ D L ++L AC Sbjct: 1228 EVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKAC 1287 Query: 325 VNDGKIELGRVGHGFCIRNNLDSDLLVMSAVIDLYSSCGKMELAQRVFDVAASRDLVVWN 146 + I LG+ HG+ ++ + + V S+++D+Y CG +E A++VFD +++V WN Sbjct: 1288 GSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWN 1347 Query: 145 TLIFAYAQYGLSGEALKHFYQMQLHGLHPNVVS 47 ++I Y Q GL+ EA+ FY M++ G+ P V+ Sbjct: 1348 SMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVT 1380 >ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740, chloroplastic-like [Vitis vinifera] Length = 858 Score = 211 bits (538), Expect = 4e-53 Identities = 102/171 (59%), Positives = 131/171 (76%) Frame = -2 Query: 517 VGLVEDAESVFDCIINRDVVTWNLLISSYVQDEQIEKAFHSCRLMRRENFKFDCVTLCSI 338 VGL+EDAE VF ++ +DVVTWNLLISSYVQ Q+ KA + C LMR EN +FD VTL SI Sbjct: 331 VGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSI 390 Query: 337 LTACVNDGKIELGRVGHGFCIRNNLDSDLLVMSAVIDLYSSCGKMELAQRVFDVAASRDL 158 L+A I+LG+ GH +CIR NL+SD++V +++ID+Y+ C +++ A++VFD RDL Sbjct: 391 LSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDL 450 Query: 157 VVWNTLIFAYAQYGLSGEALKHFYQMQLHGLHPNVVSWNSVILGLLQNRQV 5 V+WNTL+ AYAQ GLSGEALK FYQMQ + PNV+SWNSVILG L+N QV Sbjct: 451 VLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQV 501 Score = 102 bits (255), Expect = 2e-20 Identities = 58/161 (36%), Positives = 93/161 (57%) Frame = -2 Query: 514 GLVEDAESVFDCIINRDVVTWNLLISSYVQDEQIEKAFHSCRLMRRENFKFDCVTLCSIL 335 G++EDA VFD ++ ++VVTWN +I YVQ+ ++A MR E + VT+ S L Sbjct: 231 GVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFL 290 Query: 334 TACVNDGKIELGRVGHGFCIRNNLDSDLLVMSAVIDLYSSCGKMELAQRVFDVAASRDLV 155 +A N + G+ GH I N+LD D ++ S++I+ YS G +E A+ VF +D+V Sbjct: 291 SASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVV 350 Query: 154 VWNTLIFAYAQYGLSGEALKHFYQMQLHGLHPNVVSWNSVI 32 WN LI +Y Q+ G+AL + M+ L + V+ +S++ Sbjct: 351 TWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSIL 391 Score = 87.4 bits (215), Expect = 1e-15 Identities = 46/165 (27%), Positives = 91/165 (55%), Gaps = 4/165 (2%) Frame = -2 Query: 514 GLVEDAESVFDCI----INRDVVTWNLLISSYVQDEQIEKAFHSCRLMRRENFKFDCVTL 347 G V +A+ +F + +++TW LIS Q +A + M+ + ++ Sbjct: 499 GQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASI 558 Query: 346 CSILTACVNDGKIELGRVGHGFCIRNNLDSDLLVMSAVIDLYSSCGKMELAQRVFDVAAS 167 S+L AC + + GR HGF R+ + V ++++D+Y+ CG ++ A++VF + +S Sbjct: 559 TSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSS 618 Query: 166 RDLVVWNTLIFAYAQYGLSGEALKHFYQMQLHGLHPNVVSWNSVI 32 ++L ++N +I AYA +G + EAL F +Q G+ P+ +++ S++ Sbjct: 619 KELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSIL 663 Score = 82.0 bits (201), Expect = 4e-14 Identities = 46/153 (30%), Positives = 81/153 (52%) Frame = -2 Query: 505 EDAESVFDCIINRDVVTWNLLISSYVQDEQIEKAFHSCRLMRRENFKFDCVTLCSILTAC 326 E A +F + R+V +W ++ + E A M+ D L ++L AC Sbjct: 133 EVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKAC 192 Query: 325 VNDGKIELGRVGHGFCIRNNLDSDLLVMSAVIDLYSSCGKMELAQRVFDVAASRDLVVWN 146 + I LG+ HG+ ++ + + V S+++D+Y CG +E A++VFD +++V WN Sbjct: 193 GSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWN 252 Query: 145 TLIFAYAQYGLSGEALKHFYQMQLHGLHPNVVS 47 ++I Y Q GL+ EA+ FY M++ G+ P V+ Sbjct: 253 SMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVT 285 >ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740, chloroplastic-like [Cucumis sativus] gi|449520209|ref|XP_004167126.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740, chloroplastic-like [Cucumis sativus] Length = 840 Score = 209 bits (531), Expect = 2e-52 Identities = 97/171 (56%), Positives = 128/171 (74%) Frame = -2 Query: 517 VGLVEDAESVFDCIINRDVVTWNLLISSYVQDEQIEKAFHSCRLMRRENFKFDCVTLCSI 338 VGLVEDAE VF ++ +D VTWNLL+S YV + +++A C +M+ EN +FD VTL SI Sbjct: 330 VGLVEDAELVFSEMLEKDTVTWNLLVSGYVHNGLVDRALDLCHVMQSENLRFDSVTLASI 389 Query: 337 LTACVNDGKIELGRVGHGFCIRNNLDSDLLVMSAVIDLYSSCGKMELAQRVFDVAASRDL 158 + A + ++LG+ GH FC+RNNL+SD+ V S++ID+Y+ C K+E A+RVFD A RDL Sbjct: 390 MAAAADSRNLKLGKEGHSFCVRNNLESDVAVASSIIDMYAKCEKLECARRVFDATAKRDL 449 Query: 157 VVWNTLIFAYAQYGLSGEALKHFYQMQLHGLHPNVVSWNSVILGLLQNRQV 5 ++WNTL+ AYA+ G SGE LK FYQMQL GL PNV+SWNSVILGLL +V Sbjct: 450 IMWNTLLAAYAEQGHSGETLKLFYQMQLEGLPPNVISWNSVILGLLNKGKV 500 Score = 92.4 bits (228), Expect = 3e-17 Identities = 55/171 (32%), Positives = 89/171 (52%) Frame = -2 Query: 514 GLVEDAESVFDCIINRDVVTWNLLISSYVQDEQIEKAFHSCRLMRRENFKFDCVTLCSIL 335 GL E+A+ VFD I+ +++V WN +I ++ Q+ +A + MR E VTL S L Sbjct: 230 GLCEEAKKVFDKILEKNIVAWNSMIVNFTQNGLNAEAVETFYEMRVEGVAPTQVTLSSFL 289 Query: 334 TACVNDGKIELGRVGHGFCIRNNLDSDLLVMSAVIDLYSSCGKMELAQRVFDVAASRDLV 155 +A N I+ G+ GH + + L+ ++ S++I+ YS G +E A+ VF +D V Sbjct: 290 SASANLSVIDEGKQGHALAVLSGLELTNILGSSLINFYSKVGLVEDAELVFSEMLEKDTV 349 Query: 154 VWNTLIFAYAQYGLSGEALKHFYQMQLHGLHPNVVSWNSVILGLLQNRQVK 2 WN L+ Y GL AL + MQ L + V+ S++ +R +K Sbjct: 350 TWNLLVSGYVHNGLVDRALDLCHVMQSENLRFDSVTLASIMAAAADSRNLK 400 Score = 82.4 bits (202), Expect = 3e-14 Identities = 40/145 (27%), Positives = 83/145 (57%) Frame = -2 Query: 466 DVVTWNLLISSYVQDEQIEKAFHSCRLMRRENFKFDCVTLCSILTACVNDGKIELGRVGH 287 +++TW LI Q+ ++AF + + M K + +++ S+L+AC + GR H Sbjct: 518 NLITWTTLICGLAQNGLGDEAFLTFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIH 577 Query: 286 GFCIRNNLDSDLLVMSAVIDLYSSCGKMELAQRVFDVAASRDLVVWNTLIFAYAQYGLSG 107 + R+ L V+ +++++Y+ CG + A+RVFD+ ++L V+N +I YA +G + Sbjct: 578 CYITRHELSVSTPVLCSLVNMYAKCGSINQAKRVFDMILKKELPVYNAMISGYALHGQAV 637 Query: 106 EALKHFYQMQLHGLHPNVVSWNSVI 32 EAL F +++ + P+ +++ S++ Sbjct: 638 EALSLFRRLKEECIKPDEITFTSIL 662 Score = 70.9 bits (172), Expect = 1e-10 Identities = 30/93 (32%), Positives = 58/93 (62%) Frame = -2 Query: 310 IELGRVGHGFCIRNNLDSDLLVMSAVIDLYSSCGKMELAQRVFDVAASRDLVVWNTLIFA 131 I G+ H + ++ L + V ++++D+Y CG E A++VFD +++V WN++I Sbjct: 197 IGFGKSVHAYVVKMGLGGCIYVATSLLDMYGKCGLCEEAKKVFDKILEKNIVAWNSMIVN 256 Query: 130 YAQYGLSGEALKHFYQMQLHGLHPNVVSWNSVI 32 + Q GL+ EA++ FY+M++ G+ P V+ +S + Sbjct: 257 FTQNGLNAEAVETFYEMRVEGVAPTQVTLSSFL 289 >ref|XP_002529344.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223531164|gb|EEF33011.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 506 Score = 201 bits (511), Expect = 5e-50 Identities = 97/171 (56%), Positives = 127/171 (74%) Frame = -2 Query: 517 VGLVEDAESVFDCIINRDVVTWNLLISSYVQDEQIEKAFHSCRLMRRENFKFDCVTLCSI 338 VGL+EDAE VF + +DVVTWNLLISSY+Q E +EKA + C LMR +N KFD VTL SI Sbjct: 172 VGLIEDAELVFSNMAEKDVVTWNLLISSYLQCELVEKALNMCHLMRFQNMKFDSVTLDSI 231 Query: 337 LTACVNDGKIELGRVGHGFCIRNNLDSDLLVMSAVIDLYSSCGKMELAQRVFDVAASRDL 158 L+AC N I+LG+ H +CIRNNL+SD+ V +A++++Y+ CG + A+ VF+ ++DL Sbjct: 232 LSACANTKNIQLGKEAHCYCIRNNLESDVDVANAIVNMYAKCGSIHDAKEVFNSTMNKDL 291 Query: 157 VVWNTLIFAYAQYGLSGEALKHFYQMQLHGLHPNVVSWNSVILGLLQNRQV 5 +WN L+ AYAQ GL GE L+ FYQMQL + PNV SWN+VILG L+N QV Sbjct: 292 TLWNMLLTAYAQLGLVGETLRLFYQMQLESVPPNVTSWNAVILGFLRNGQV 342 Score = 99.8 bits (247), Expect = 2e-19 Identities = 53/171 (30%), Positives = 93/171 (54%) Frame = -2 Query: 514 GLVEDAESVFDCIINRDVVTWNLLISSYVQDEQIEKAFHSCRLMRRENFKFDCVTLCSIL 335 G++ DA VFD + ++VVTWN +I YVQ+ +A MR E+ ++ VTL L Sbjct: 72 GILMDARKVFDAMRQKNVVTWNSMIMGYVQNGLYLEAIKVFANMRLEDIEYSRVTLLGFL 131 Query: 334 TACVNDGKIELGRVGHGFCIRNNLDSDLLVMSAVIDLYSSCGKMELAQRVFDVAASRDLV 155 +A N G + G+ GH ++ + D ++ S++++ YS G +E A+ VF A +D+V Sbjct: 132 SAAANLGAVTEGKQGHAIAVKGGYELDNILGSSILNFYSKVGLIEDAELVFSNMAEKDVV 191 Query: 154 VWNTLIFAYAQYGLSGEALKHFYQMQLHGLHPNVVSWNSVILGLLQNRQVK 2 WN LI +Y Q L +AL + M+ + + V+ +S++ + ++ Sbjct: 192 TWNLLISSYLQCELVEKALNMCHLMRFQNMKFDSVTLDSILSACANTKNIQ 242 Score = 68.6 bits (166), Expect = 5e-10 Identities = 38/106 (35%), Positives = 60/106 (56%) Frame = -2 Query: 337 LTACVNDGKIELGRVGHGFCIRNNLDSDLLVMSAVIDLYSSCGKMELAQRVFDVAASRDL 158 L AC I G+ HG+ ++ LD + V S++ID+Y CG + A++VFD +++ Sbjct: 30 LKACGALYWIRFGKGVHGYVVKMGLDGCVFVSSSLIDMYGKCGILMDARKVFDAMRQKNV 89 Query: 157 VVWNTLIFAYAQYGLSGEALKHFYQMQLHGLHPNVVSWNSVILGLL 20 V WN++I Y Q GL EA+K F M+L + + V+ +LG L Sbjct: 90 VTWNSMIMGYVQNGLYLEAIKVFANMRLEDIEYSRVT----LLGFL 131 >gb|ACZ98537.1| PPR motif protein [Malus x domestica] Length = 751 Score = 200 bits (509), Expect = 9e-50 Identities = 91/171 (53%), Positives = 134/171 (78%) Frame = -2 Query: 517 VGLVEDAESVFDCIINRDVVTWNLLISSYVQDEQIEKAFHSCRLMRRENFKFDCVTLCSI 338 VGL+EDAESVF ++ +DVVTWNLLIS YVQ +++KA + C LMR EN +FD VTL ++ Sbjct: 248 VGLIEDAESVFSRMLEKDVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDSVTLATL 307 Query: 337 LTACVNDGKIELGRVGHGFCIRNNLDSDLLVMSAVIDLYSSCGKMELAQRVFDVAASRDL 158 ++A + ++LG+ GH +CIRNNL+SD++V+S+++D+Y+ C K+ A+RVF+ + ++DL Sbjct: 308 MSAFADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSITKDL 367 Query: 157 VVWNTLIFAYAQYGLSGEALKHFYQMQLHGLHPNVVSWNSVILGLLQNRQV 5 ++WNT++ A+A+ G SGEAL FYQMQL + PNV+SWNS+ILG L + QV Sbjct: 368 ILWNTMLAAFAELGHSGEALNLFYQMQLESVPPNVISWNSLILGFLNSGQV 418 Score = 89.0 bits (219), Expect = 4e-16 Identities = 45/165 (27%), Positives = 95/165 (57%), Gaps = 4/165 (2%) Frame = -2 Query: 514 GLVEDAESVF----DCIINRDVVTWNLLISSYVQDEQIEKAFHSCRLMRRENFKFDCVTL 347 G V +A+ +F + ++VTW LIS + +A + + M+ K + V++ Sbjct: 416 GQVNEAKDMFLQMQSLGVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSI 475 Query: 346 CSILTACVNDGKIELGRVGHGFCIRNNLDSDLLVMSAVIDLYSSCGKMELAQRVFDVAAS 167 +L AC+N +++GR HG+ IR++L + + ++++D+Y+ CG + A+RVFD+ Sbjct: 476 IGVLLACINLASLQIGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDMIPD 535 Query: 166 RDLVVWNTLIFAYAQYGLSGEALKHFYQMQLHGLHPNVVSWNSVI 32 ++L ++N +I +A +G + EAL + ++ GL P+ +++ + + Sbjct: 536 KELPIYNAMISGFALHGQAVEALALYRCLKEEGLKPDNITFTNAL 580 Score = 80.9 bits (198), Expect = 1e-13 Identities = 50/156 (32%), Positives = 79/156 (50%) Frame = -2 Query: 469 RDVVTWNLLISSYVQDEQIEKAFHSCRLMRRENFKFDCVTLCSILTACVNDGKIELGRVG 290 R+ V WN +I YVQ+ E+A MR E + VTL S L+A N G ++ G+ G Sbjct: 163 RNAVAWNSMIVGYVQNGLNEEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGKQG 222 Query: 289 HGFCIRNNLDSDLLVMSAVIDLYSSCGKMELAQRVFDVAASRDLVVWNTLIFAYAQYGLS 110 H + ++ + S++I+ YS G +E A+ VF +D+V WN LI Y Q G Sbjct: 223 HAIAVICGIEMTTNLGSSLINFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGYVQIGEV 282 Query: 109 GEALKHFYQMQLHGLHPNVVSWNSVILGLLQNRQVK 2 +AL + M+L L + V+ +++ R +K Sbjct: 283 DKALNMCHLMRLENLRFDSVTLATLMSAFADMRNLK 318