BLASTX nr result

ID: Dioscorea21_contig00027496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027496
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315967.1| predicted protein [Populus trichocarpa] gi|2...   130   8e-29
ref|XP_003609136.1| hypothetical protein MTR_4g112370 [Medicago ...   119   3e-25
ref|XP_002317922.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
gb|ACJ84318.1| unknown [Medicago truncatula] gi|388515575|gb|AFK...   117   1e-24
ref|XP_002328689.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23

>ref|XP_002315967.1| predicted protein [Populus trichocarpa] gi|222865007|gb|EEF02138.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score =  130 bits (328), Expect = 8e-29
 Identities = 82/174 (47%), Positives = 100/174 (57%), Gaps = 24/174 (13%)
 Frame = -3

Query: 452 MRTIMARTPHDSS---SRRHFQWIMNKIEKVSSGDNNI------------GDDEL----- 333
           M+TIMA+TPHDSS   SRRHF W    +E     +  +             D EL     
Sbjct: 1   MKTIMAKTPHDSSFSFSRRHFNWRKKVVEDEEDDEEILTFNSSSHCEELENDQELRITMP 60

Query: 332 ----VEDGNKRRQRPVSSISXXXXXXXXXXXXXXXXXAGLGPRVTGTLFGRRRGHVHFAF 165
                +   +++  P+ + S                 +GLG RV GTLFG RRGHVHFAF
Sbjct: 61  AAGTTQSVPRKKTLPILAFSKLRSALTVFSKSRSAYHSGLGTRVVGTLFGYRRGHVHFAF 120

Query: 164 QTDSRSSPAALIELATPTSTLVREMASGLVRIALECERRSAGPGSGKRLLEEPL 3
           Q D++ +PA LIELATPTS LVREMASGLVRIALECE++ AG  +GK LLEEPL
Sbjct: 121 QEDAKQNPALLIELATPTSVLVREMASGLVRIALECEKK-AGKKAGK-LLEEPL 172


>ref|XP_003609136.1| hypothetical protein MTR_4g112370 [Medicago truncatula]
           gi|355510191|gb|AES91333.1| hypothetical protein
           MTR_4g112370 [Medicago truncatula]
          Length = 322

 Score =  119 bits (297), Expect = 3e-25
 Identities = 75/160 (46%), Positives = 91/160 (56%), Gaps = 17/160 (10%)
 Frame = -3

Query: 431 TPHDSSSRRHFQWIMNKIEKVSSGDNNIGDDELVEDGN--KRRQRPVS------------ 294
           TP D SS+RHF W  NK+    S + +    +++++ N  K  ++PVS            
Sbjct: 7   TPQDPSSKRHFHWT-NKVGNEDSEEPSPTMSKIIQEQNTKKHEEKPVSGGHAATRKKLQT 65

Query: 293 -SISXXXXXXXXXXXXXXXXXAGLGPRVTGTLFGRRRGHVHFAFQTDSRSSPAALIELAT 117
            +IS                 +GLG RV GTLFG RRGHVHFAFQ D  S PA LIELAT
Sbjct: 66  VAISRIRSVLTVFSKNRSNLPSGLGSRVVGTLFGYRRGHVHFAFQKDPTSQPAFLIELAT 125

Query: 116 PTSTLVREMASGLVRIALECERRSAGPGSGK--RLLEEPL 3
           P S LVREMASGLVRIALEC++     G  K  RLL+EPL
Sbjct: 126 PISGLVREMASGLVRIALECDKVKEKEGEKKSLRLLQEPL 165


>ref|XP_002317922.1| predicted protein [Populus trichocarpa] gi|222858595|gb|EEE96142.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score =  117 bits (293), Expect = 1e-24
 Identities = 72/158 (45%), Positives = 86/158 (54%), Gaps = 12/158 (7%)
 Frame = -3

Query: 440 MARTPHDSSSRRHFQWIMN----KIE----KVSSGDNNIGDDELVEDG----NKRRQRPV 297
           MART  DSSS+RHF W        +E    K SS  N    +E V+        +++ P 
Sbjct: 1   MARTSEDSSSKRHFHWTKKVGNEDVEAPSIKSSSNPNEQDKNENVKSHVAMPTPKKRLPA 60

Query: 296 SSISXXXXXXXXXXXXXXXXXAGLGPRVTGTLFGRRRGHVHFAFQTDSRSSPAALIELAT 117
            +++                  GLG RV GTLFG RRGHVHFAFQ D  S P  LIELAT
Sbjct: 61  VAVARLRSVLAALGKNRSSLPMGLGSRVVGTLFGYRRGHVHFAFQRDPNSPPTFLIELAT 120

Query: 116 PTSTLVREMASGLVRIALECERRSAGPGSGKRLLEEPL 3
           P S LVREMASGLVRIALEC++         +LLEEP+
Sbjct: 121 PISGLVREMASGLVRIALECDKEKEDQKKAVKLLEEPM 158


>gb|ACJ84318.1| unknown [Medicago truncatula] gi|388515575|gb|AFK45849.1| unknown
           [Medicago truncatula]
          Length = 255

 Score =  117 bits (293), Expect = 1e-24
 Identities = 74/160 (46%), Positives = 90/160 (56%), Gaps = 17/160 (10%)
 Frame = -3

Query: 431 TPHDSSSRRHFQWIMNKIEKVSSGDNNIGDDELVEDGN--KRRQRPVS------------ 294
           TP D SS+RHF W  NK+    S + +    +++++ N  K  ++PVS            
Sbjct: 7   TPQDPSSKRHFHWT-NKVGNEDSEEPSPTMSKIIQEQNTKKHEEKPVSGGHAATRKKLQT 65

Query: 293 -SISXXXXXXXXXXXXXXXXXAGLGPRVTGTLFGRRRGHVHFAFQTDSRSSPAALIELAT 117
            +IS                 +GLG RV GTLFG RRGHVHFAFQ D  S PA LIELAT
Sbjct: 66  VAISRIRSVLTVFSKNRSNLPSGLGSRVVGTLFGYRRGHVHFAFQKDPTSQPAFLIELAT 125

Query: 116 PTSTLVREMASGLVRIALECERRSAGPGSGK--RLLEEPL 3
           P S LVREMASGLVRI LEC++     G  K  RLL+EPL
Sbjct: 126 PISGLVREMASGLVRIVLECDKVKEKEGEKKSLRLLQEPL 165


>ref|XP_002328689.1| predicted protein [Populus trichocarpa] gi|222838865|gb|EEE77216.1|
           predicted protein [Populus trichocarpa]
          Length = 248

 Score =  112 bits (280), Expect = 3e-23
 Identities = 69/161 (42%), Positives = 85/161 (52%), Gaps = 15/161 (9%)
 Frame = -3

Query: 440 MARTPHDSSSRRHFQWIMNKIEKVSSGDNNIG---DDELVEDGNK------------RRQ 306
           MAR   DSSS+ HF W     +KV + D+ +        +E+  K            +++
Sbjct: 1   MARASQDSSSKWHFHWT----KKVGNEDDEVPIFKSSNTIEEEKKENVKSHVGMSTPKKK 56

Query: 305 RPVSSISXXXXXXXXXXXXXXXXXAGLGPRVTGTLFGRRRGHVHFAFQTDSRSSPAALIE 126
            P  +++                  GLG RV GTLFG RRGHVHFAFQ D  S PA LIE
Sbjct: 57  LPAVAVARLRSVVTALGKNRSSLPLGLGSRVVGTLFGYRRGHVHFAFQKDPNSPPAFLIE 116

Query: 125 LATPTSTLVREMASGLVRIALECERRSAGPGSGKRLLEEPL 3
           LATP S LVREMASGLVRIALEC++         RL EEP+
Sbjct: 117 LATPISGLVREMASGLVRIALECDKEKEEEKKAVRLQEEPM 157


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