BLASTX nr result

ID: Dioscorea21_contig00027493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027493
         (889 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314089.1| predicted protein [Populus trichocarpa] gi|1...   290   2e-76
ref|XP_002513536.1| ubiquitin-conjugating enzyme E2 C, putative ...   288   2e-75
ref|XP_002299793.1| predicted protein [Populus trichocarpa] gi|1...   286   6e-75
ref|XP_002278564.1| PREDICTED: ubiquitin-conjugating enzyme E2 1...   285   8e-75
ref|XP_004140207.1| PREDICTED: ubiquitin-conjugating enzyme E2 1...   285   1e-74

>ref|XP_002314089.1| predicted protein [Populus trichocarpa] gi|118482900|gb|ABK93364.1|
           unknown [Populus trichocarpa]
           gi|222850497|gb|EEE88044.1| predicted protein [Populus
           trichocarpa]
          Length = 179

 Score =  290 bits (743), Expect = 2e-76
 Identities = 139/163 (85%), Positives = 149/163 (91%)
 Frame = +3

Query: 189 PLPQSAAKQPLPVAKSVDAQSVLKRLQSELMALMMSGDPGISAFPEGDNIFCWKGTITGS 368
           P   + +KQ +P AK+VD QSVLKRLQSELMALMMSG+ GISAFPEGDNIFCWKGTITGS
Sbjct: 13  PAGTTPSKQTVPSAKTVDTQSVLKRLQSELMALMMSGESGISAFPEGDNIFCWKGTITGS 72

Query: 369 KDTVYEGMVYKLALSFPNDYPFKPPKVKFDSSCFHPNVDVYGNICLDILQDKWSSAYDVR 548
           KDTV+EG  YKL+LSFPNDYPFKPPKVKF++SCFHPNVDVYGNICLDILQDKWSSAYDVR
Sbjct: 73  KDTVFEGTEYKLSLSFPNDYPFKPPKVKFETSCFHPNVDVYGNICLDILQDKWSSAYDVR 132

Query: 549 TILISIQSLLGEPNNDSPLNTQAAALWGNQEEYRKMVEKLYKP 677
           TIL+SIQSLLGEPN  SPLNTQAA LW NQEEYRKMVEKLYKP
Sbjct: 133 TILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKP 175


>ref|XP_002513536.1| ubiquitin-conjugating enzyme E2 C, putative [Ricinus communis]
           gi|223547444|gb|EEF48939.1| ubiquitin-conjugating enzyme
           E2 C, putative [Ricinus communis]
          Length = 179

 Score =  288 bits (736), Expect = 2e-75
 Identities = 139/168 (82%), Positives = 148/168 (88%)
 Frame = +3

Query: 174 GIAPTPLPQSAAKQPLPVAKSVDAQSVLKRLQSELMALMMSGDPGISAFPEGDNIFCWKG 353
           G  P     + +KQ +P  K+VD QSVLKRLQSELMALMMSG+ GISAFPE DNIFCWKG
Sbjct: 9   GNTPVASAGAPSKQTVPTVKTVDTQSVLKRLQSELMALMMSGESGISAFPEEDNIFCWKG 68

Query: 354 TITGSKDTVYEGMVYKLALSFPNDYPFKPPKVKFDSSCFHPNVDVYGNICLDILQDKWSS 533
           TITGSKDTV+EG  YKL+LSFPNDYPFKPPKVKF++SCFHPNVDVYGNICLDILQDKWSS
Sbjct: 69  TITGSKDTVFEGTEYKLSLSFPNDYPFKPPKVKFETSCFHPNVDVYGNICLDILQDKWSS 128

Query: 534 AYDVRTILISIQSLLGEPNNDSPLNTQAAALWGNQEEYRKMVEKLYKP 677
           AYDVRTILISIQSLLGEPN  SPLNTQAA LW NQEEYRKMVEKLYKP
Sbjct: 129 AYDVRTILISIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKP 176


>ref|XP_002299793.1| predicted protein [Populus trichocarpa] gi|118484879|gb|ABK94306.1|
           unknown [Populus trichocarpa]
           gi|222847051|gb|EEE84598.1| predicted protein [Populus
           trichocarpa]
          Length = 183

 Score =  286 bits (731), Expect = 6e-75
 Identities = 140/173 (80%), Positives = 150/173 (86%)
 Frame = +3

Query: 159 QDNIPGIAPTPLPQSAAKQPLPVAKSVDAQSVLKRLQSELMALMMSGDPGISAFPEGDNI 338
           Q N P  AP     + AKQ +  AK VD QSVLKRLQSELMALMMSG+ GISAFPEGDNI
Sbjct: 8   QGNTPVAAPAGT--TPAKQTVTAAKIVDTQSVLKRLQSELMALMMSGESGISAFPEGDNI 65

Query: 339 FCWKGTITGSKDTVYEGMVYKLALSFPNDYPFKPPKVKFDSSCFHPNVDVYGNICLDILQ 518
           FCWKGTI GSKDTV+EG  YKL+LSFPNDYPFKPPKVKF++SCFHPNVD+YGNICLDILQ
Sbjct: 66  FCWKGTIKGSKDTVFEGTEYKLSLSFPNDYPFKPPKVKFETSCFHPNVDIYGNICLDILQ 125

Query: 519 DKWSSAYDVRTILISIQSLLGEPNNDSPLNTQAAALWGNQEEYRKMVEKLYKP 677
           DKWSSAYDVRTIL+SIQSLLGEPN  SPLNTQAA LW NQ+EYRKMVEKLYKP
Sbjct: 126 DKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQQEYRKMVEKLYKP 178


>ref|XP_002278564.1| PREDICTED: ubiquitin-conjugating enzyme E2 19 [Vitis vinifera]
           gi|147820972|emb|CAN74597.1| hypothetical protein
           VITISV_003479 [Vitis vinifera]
           gi|297734957|emb|CBI17191.3| unnamed protein product
           [Vitis vinifera]
          Length = 177

 Score =  285 bits (730), Expect = 8e-75
 Identities = 144/178 (80%), Positives = 150/178 (84%), Gaps = 2/178 (1%)
 Frame = +3

Query: 147 NQDVQDNI--PGIAPTPLPQSAAKQPLPVAKSVDAQSVLKRLQSELMALMMSGDPGISAF 320
           N   QDN   P +A T       KQPLP AKSVD QSVLKRLQSELMALMMSGD GISAF
Sbjct: 5   NNSYQDNNNNPAVAAT-------KQPLPPAKSVDTQSVLKRLQSELMALMMSGDGGISAF 57

Query: 321 PEGDNIFCWKGTITGSKDTVYEGMVYKLALSFPNDYPFKPPKVKFDSSCFHPNVDVYGNI 500
           PE DNIFCWKGTI GSKDTV+EG  YKL+LSFP DYPFKPPKVKF++ CFHPNVDVYGNI
Sbjct: 58  PEEDNIFCWKGTINGSKDTVFEGTEYKLSLSFPTDYPFKPPKVKFETGCFHPNVDVYGNI 117

Query: 501 CLDILQDKWSSAYDVRTILISIQSLLGEPNNDSPLNTQAAALWGNQEEYRKMVEKLYK 674
           CLDILQDKWSSAYDVRTIL+SIQSLLGEPN  SPLNTQAAALW NQEEYRKMV KLYK
Sbjct: 118 CLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAALWSNQEEYRKMVMKLYK 175


>ref|XP_004140207.1| PREDICTED: ubiquitin-conjugating enzyme E2 19-like [Cucumis
           sativus] gi|449482542|ref|XP_004156314.1| PREDICTED:
           ubiquitin-conjugating enzyme E2 19-like [Cucumis
           sativus]
          Length = 181

 Score =  285 bits (729), Expect = 1e-74
 Identities = 138/166 (83%), Positives = 147/166 (88%)
 Frame = +3

Query: 180 APTPLPQSAAKQPLPVAKSVDAQSVLKRLQSELMALMMSGDPGISAFPEGDNIFCWKGTI 359
           AP     S AKQ LP AK+ D+QSVLKRLQSELMALMMSGD GISAFPE DNIFCWKGTI
Sbjct: 12  APANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPEEDNIFCWKGTI 71

Query: 360 TGSKDTVYEGMVYKLALSFPNDYPFKPPKVKFDSSCFHPNVDVYGNICLDILQDKWSSAY 539
           TGSK+TV+EG  Y+L+ SFPNDYPFKPPKVKF++ CFHPNVDVYGNICLDILQDKWSSAY
Sbjct: 72  TGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICLDILQDKWSSAY 131

Query: 540 DVRTILISIQSLLGEPNNDSPLNTQAAALWGNQEEYRKMVEKLYKP 677
           DVRTIL+SIQSLLGEPN  SPLNTQAA LW NQEEYRKMVEKLYKP
Sbjct: 132 DVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKP 177


Top