BLASTX nr result

ID: Dioscorea21_contig00027479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027479
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522809.1| 3'-5' exonuclease, putative [Ricinus communi...    90   2e-16
gb|ACG35146.1| Werner syndrome ATP-dependent helicase [Zea mays]       89   5e-16
ref|NP_001131769.1| werner syndrome ATP-dependent helicase isofo...    89   5e-16
ref|XP_002447451.1| hypothetical protein SORBIDRAFT_06g001220 [S...    87   1e-15
ref|XP_003580248.1| PREDICTED: Werner Syndrome-like exonuclease-...    86   2e-15

>ref|XP_002522809.1| 3'-5' exonuclease, putative [Ricinus communis]
           gi|223538047|gb|EEF39660.1| 3'-5' exonuclease, putative
           [Ricinus communis]
          Length = 149

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 40/56 (71%), Positives = 47/56 (83%)
 Frame = -2

Query: 362 RNWSLSSLTETLTCKELEKPKKIRLGNWQTNILSQAQLQYAATDAFVSWYLYQVLR 195
           ++WSL SLTE L CKEL KP KIRLGNW+ ++LS+ QL+YAATDAF SW LYQVLR
Sbjct: 74  KSWSLQSLTEMLVCKELGKPNKIRLGNWEVDVLSKEQLEYAATDAFASWQLYQVLR 129


>gb|ACG35146.1| Werner syndrome ATP-dependent helicase [Zea mays]
          Length = 303

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 36/56 (64%), Positives = 48/56 (85%)
 Frame = -2

Query: 362 RNWSLSSLTETLTCKELEKPKKIRLGNWQTNILSQAQLQYAATDAFVSWYLYQVLR 195
           + WSL+SLTE +TCKEL KP  IR+GNW+ ++LS+ QLQYAATDA++SWYLY+ L+
Sbjct: 233 KRWSLASLTEMITCKELPKPSNIRMGNWEADVLSKQQLQYAATDAYISWYLYEALQ 288


>ref|NP_001131769.1| werner syndrome ATP-dependent helicase isoform 1 [Zea mays]
           gi|194692488|gb|ACF80328.1| unknown [Zea mays]
           gi|414588129|tpg|DAA38700.1| TPA: werner syndrome
           ATP-dependent helicase isoform 1 [Zea mays]
           gi|414588130|tpg|DAA38701.1| TPA: werner syndrome
           ATP-dependent helicase isoform 2 [Zea mays]
          Length = 303

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 36/56 (64%), Positives = 48/56 (85%)
 Frame = -2

Query: 362 RNWSLSSLTETLTCKELEKPKKIRLGNWQTNILSQAQLQYAATDAFVSWYLYQVLR 195
           + WSL+SLTE +TCKEL KP  IR+GNW+ ++LS+ QLQYAATDA++SWYLY+ L+
Sbjct: 233 KRWSLASLTEMITCKELPKPSNIRMGNWEADVLSKQQLQYAATDAYISWYLYEALQ 288


>ref|XP_002447451.1| hypothetical protein SORBIDRAFT_06g001220 [Sorghum bicolor]
           gi|241938634|gb|EES11779.1| hypothetical protein
           SORBIDRAFT_06g001220 [Sorghum bicolor]
          Length = 311

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 35/56 (62%), Positives = 48/56 (85%)
 Frame = -2

Query: 362 RNWSLSSLTETLTCKELEKPKKIRLGNWQTNILSQAQLQYAATDAFVSWYLYQVLR 195
           + WSL+SLTE +TCKEL KP  IR+GNW+ ++L++ QLQYAATDA++SWYLY+ L+
Sbjct: 237 KRWSLASLTEMITCKELPKPSNIRMGNWEVDVLTKQQLQYAATDAYISWYLYEALQ 292


>ref|XP_003580248.1| PREDICTED: Werner Syndrome-like exonuclease-like [Brachypodium
           distachyon]
          Length = 292

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 36/56 (64%), Positives = 47/56 (83%)
 Frame = -2

Query: 362 RNWSLSSLTETLTCKELEKPKKIRLGNWQTNILSQAQLQYAATDAFVSWYLYQVLR 195
           + WSL++LTE +TCKEL KP  IR+GNW+   LS+ QLQYAATDA++SWYLY+VL+
Sbjct: 223 KRWSLAALTEMITCKELPKPSNIRMGNWEAYTLSKQQLQYAATDAYISWYLYEVLQ 278


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