BLASTX nr result
ID: Dioscorea21_contig00027478
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00027478 (464 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002532272.1| Protein AFR, putative [Ricinus communis] gi|... 82 3e-14 ref|XP_003523259.1| PREDICTED: F-box/kelch-repeat protein SKIP6-... 77 1e-12 emb|CBI21507.3| unnamed protein product [Vitis vinifera] 77 1e-12 ref|XP_002276023.1| PREDICTED: F-box/kelch-repeat protein SKIP6-... 77 1e-12 dbj|BAK03883.1| predicted protein [Hordeum vulgare subsp. vulgare] 76 2e-12 >ref|XP_002532272.1| Protein AFR, putative [Ricinus communis] gi|223528032|gb|EEF30112.1| Protein AFR, putative [Ricinus communis] Length = 370 Score = 82.4 bits (202), Expect = 3e-14 Identities = 52/158 (32%), Positives = 73/158 (46%), Gaps = 5/158 (3%) Frame = +2 Query: 2 NSALPPLVPFFPDEISIQILARLPXXXXXXXXXXXXXWRSILHSPLLVAXXXXXXXXXXX 181 +S LP L+P PD+IS+ ILAR+P + S+ SPL A Sbjct: 13 SSNLPLLIPALPDDISLNILARIPRSHHPLLSLVSKSFHSLFSSPLFYATRSLLNFSQPF 72 Query: 182 XXXNVRTHSGSSL-WFPV----DXXXXXXXXXXXXXXXXXXVSGAATATLGHELYLLGGS 346 ++R SSL WF + + G+AT +LGH++Y++GG Sbjct: 73 LYLSIRFAITSSLRWFTLYQNSPNPKNPPNFLVQLLPTPSPLVGSATVSLGHKIYVIGGC 132 Query: 347 LNGIPSAVVQIFDAASRRWSLGPRMSTGREFSAAAALN 460 LN IPS+ V D W L P+MS REF+AA +N Sbjct: 133 LNDIPSSHVWTLDCRFHMWELSPKMSISREFAAAGVVN 170 >ref|XP_003523259.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Glycine max] Length = 359 Score = 77.4 bits (189), Expect = 1e-12 Identities = 45/148 (30%), Positives = 67/148 (45%) Frame = +2 Query: 20 LVPFFPDEISIQILARLPXXXXXXXXXXXXXWRSILHSPLLVAXXXXXXXXXXXXXXNVR 199 L+P+ P+++++ LAR+P RS+L+SPLL +R Sbjct: 17 LIPYLPNDVALNCLARIPRSHHPTLSLVSKPIRSLLYSPLLFTTRSLLQCTQPLLYLTLR 76 Query: 200 THSGSSLWFPVDXXXXXXXXXXXXXXXXXXVSGAATATLGHELYLLGGSLNGIPSAVVQI 379 + S WF + V G+A A LG +Y+LGGS+ +PS+ V + Sbjct: 77 SRDSSLQWFTLHRTNPNPLLAPLPPIPSPAV-GSAYAVLGPTIYVLGGSIQDVPSSHVWL 135 Query: 380 FDAASRRWSLGPRMSTGREFSAAAALNG 463 D RW GP M REF+AA L+G Sbjct: 136 LDCRFHRWLRGPPMRVAREFAAAGVLHG 163 >emb|CBI21507.3| unnamed protein product [Vitis vinifera] Length = 344 Score = 77.0 bits (188), Expect = 1e-12 Identities = 46/152 (30%), Positives = 72/152 (47%) Frame = +2 Query: 2 NSALPPLVPFFPDEISIQILARLPXXXXXXXXXXXXXWRSILHSPLLVAXXXXXXXXXXX 181 +S+ L+P PD++++Q +AR+P WRSIL+SP + Sbjct: 16 SSSSSDLIPNLPDDVALQCIARVPRSRHPHLLLVCKSWRSILNSPDFFSTRSLLNCMQHS 75 Query: 182 XXXNVRTHSGSSLWFPVDXXXXXXXXXXXXXXXXXXVSGAATATLGHELYLLGGSLNGIP 361 VR + + WF ++ G+A A +G ++++LGGS+N + Sbjct: 76 LYLIVRVNC-TLKWFVLN---QNPRILASLPPNPSPAIGSAFAAIGSKIFVLGGSVNDVA 131 Query: 362 SAVVQIFDAASRRWSLGPRMSTGREFSAAAAL 457 S VQ+FD W LGPRM GREF+AA + Sbjct: 132 SPTVQVFDCRFGTWELGPRMRVGREFAAAGVV 163 >ref|XP_002276023.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Vitis vinifera] Length = 361 Score = 77.0 bits (188), Expect = 1e-12 Identities = 46/152 (30%), Positives = 72/152 (47%) Frame = +2 Query: 2 NSALPPLVPFFPDEISIQILARLPXXXXXXXXXXXXXWRSILHSPLLVAXXXXXXXXXXX 181 +S+ L+P PD++++Q +AR+P WRSIL+SP + Sbjct: 16 SSSSSDLIPNLPDDVALQCIARVPRSRHPHLLLVCKSWRSILNSPDFFSTRSLLNCMQHS 75 Query: 182 XXXNVRTHSGSSLWFPVDXXXXXXXXXXXXXXXXXXVSGAATATLGHELYLLGGSLNGIP 361 VR + + WF ++ G+A A +G ++++LGGS+N + Sbjct: 76 LYLIVRVNC-TLKWFVLN---QNPRILASLPPNPSPAIGSAFAAIGSKIFVLGGSVNDVA 131 Query: 362 SAVVQIFDAASRRWSLGPRMSTGREFSAAAAL 457 S VQ+FD W LGPRM GREF+AA + Sbjct: 132 SPTVQVFDCRFGTWELGPRMRVGREFAAAGVV 163 >dbj|BAK03883.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 359 Score = 76.3 bits (186), Expect = 2e-12 Identities = 49/150 (32%), Positives = 72/150 (48%), Gaps = 2/150 (1%) Frame = +2 Query: 20 LVPFFPDEISIQILARLPXXXXXXXXXXXXXWRSIL--HSPLLVAXXXXXXXXXXXXXXN 193 L+P PD+++IQ +A LP ++L H L+A + Sbjct: 1 LIPVLPDDLAIQCIALLPRAAHPTLALVSRALHALLCLHPEPLLAARRRLCRSDPHIVIS 60 Query: 194 VRTHSGSSLWFPVDXXXXXXXXXXXXXXXXXXVSGAATATLGHELYLLGGSLNGIPSAVV 373 VR +S F + S +A A GH LYL+GGS+ G+P++ V Sbjct: 61 VRPPYSASPRFFLLLPHPGWPPLPLPSPPIPVSSSSAVAVNGHRLYLVGGSVAGVPASSV 120 Query: 374 QIFDAASRRWSLGPRMSTGREFSAAAALNG 463 QI D+ +R WS+GPR+S+ REF+AAA L G Sbjct: 121 QILDSRTRSWSIGPRLSSPREFAAAAVLPG 150