BLASTX nr result

ID: Dioscorea21_contig00027478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027478
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532272.1| Protein AFR, putative [Ricinus communis] gi|...    82   3e-14
ref|XP_003523259.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...    77   1e-12
emb|CBI21507.3| unnamed protein product [Vitis vinifera]               77   1e-12
ref|XP_002276023.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...    77   1e-12
dbj|BAK03883.1| predicted protein [Hordeum vulgare subsp. vulgare]     76   2e-12

>ref|XP_002532272.1| Protein AFR, putative [Ricinus communis]
           gi|223528032|gb|EEF30112.1| Protein AFR, putative
           [Ricinus communis]
          Length = 370

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 52/158 (32%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
 Frame = +2

Query: 2   NSALPPLVPFFPDEISIQILARLPXXXXXXXXXXXXXWRSILHSPLLVAXXXXXXXXXXX 181
           +S LP L+P  PD+IS+ ILAR+P             + S+  SPL  A           
Sbjct: 13  SSNLPLLIPALPDDISLNILARIPRSHHPLLSLVSKSFHSLFSSPLFYATRSLLNFSQPF 72

Query: 182 XXXNVRTHSGSSL-WFPV----DXXXXXXXXXXXXXXXXXXVSGAATATLGHELYLLGGS 346
              ++R    SSL WF +                       + G+AT +LGH++Y++GG 
Sbjct: 73  LYLSIRFAITSSLRWFTLYQNSPNPKNPPNFLVQLLPTPSPLVGSATVSLGHKIYVIGGC 132

Query: 347 LNGIPSAVVQIFDAASRRWSLGPRMSTGREFSAAAALN 460
           LN IPS+ V   D     W L P+MS  REF+AA  +N
Sbjct: 133 LNDIPSSHVWTLDCRFHMWELSPKMSISREFAAAGVVN 170


>ref|XP_003523259.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Glycine max]
          Length = 359

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 45/148 (30%), Positives = 67/148 (45%)
 Frame = +2

Query: 20  LVPFFPDEISIQILARLPXXXXXXXXXXXXXWRSILHSPLLVAXXXXXXXXXXXXXXNVR 199
           L+P+ P+++++  LAR+P              RS+L+SPLL                 +R
Sbjct: 17  LIPYLPNDVALNCLARIPRSHHPTLSLVSKPIRSLLYSPLLFTTRSLLQCTQPLLYLTLR 76

Query: 200 THSGSSLWFPVDXXXXXXXXXXXXXXXXXXVSGAATATLGHELYLLGGSLNGIPSAVVQI 379
           +   S  WF +                   V G+A A LG  +Y+LGGS+  +PS+ V +
Sbjct: 77  SRDSSLQWFTLHRTNPNPLLAPLPPIPSPAV-GSAYAVLGPTIYVLGGSIQDVPSSHVWL 135

Query: 380 FDAASRRWSLGPRMSTGREFSAAAALNG 463
            D    RW  GP M   REF+AA  L+G
Sbjct: 136 LDCRFHRWLRGPPMRVAREFAAAGVLHG 163


>emb|CBI21507.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 46/152 (30%), Positives = 72/152 (47%)
 Frame = +2

Query: 2   NSALPPLVPFFPDEISIQILARLPXXXXXXXXXXXXXWRSILHSPLLVAXXXXXXXXXXX 181
           +S+   L+P  PD++++Q +AR+P             WRSIL+SP   +           
Sbjct: 16  SSSSSDLIPNLPDDVALQCIARVPRSRHPHLLLVCKSWRSILNSPDFFSTRSLLNCMQHS 75

Query: 182 XXXNVRTHSGSSLWFPVDXXXXXXXXXXXXXXXXXXVSGAATATLGHELYLLGGSLNGIP 361
               VR +  +  WF ++                    G+A A +G ++++LGGS+N + 
Sbjct: 76  LYLIVRVNC-TLKWFVLN---QNPRILASLPPNPSPAIGSAFAAIGSKIFVLGGSVNDVA 131

Query: 362 SAVVQIFDAASRRWSLGPRMSTGREFSAAAAL 457
           S  VQ+FD     W LGPRM  GREF+AA  +
Sbjct: 132 SPTVQVFDCRFGTWELGPRMRVGREFAAAGVV 163


>ref|XP_002276023.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Vitis vinifera]
          Length = 361

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 46/152 (30%), Positives = 72/152 (47%)
 Frame = +2

Query: 2   NSALPPLVPFFPDEISIQILARLPXXXXXXXXXXXXXWRSILHSPLLVAXXXXXXXXXXX 181
           +S+   L+P  PD++++Q +AR+P             WRSIL+SP   +           
Sbjct: 16  SSSSSDLIPNLPDDVALQCIARVPRSRHPHLLLVCKSWRSILNSPDFFSTRSLLNCMQHS 75

Query: 182 XXXNVRTHSGSSLWFPVDXXXXXXXXXXXXXXXXXXVSGAATATLGHELYLLGGSLNGIP 361
               VR +  +  WF ++                    G+A A +G ++++LGGS+N + 
Sbjct: 76  LYLIVRVNC-TLKWFVLN---QNPRILASLPPNPSPAIGSAFAAIGSKIFVLGGSVNDVA 131

Query: 362 SAVVQIFDAASRRWSLGPRMSTGREFSAAAAL 457
           S  VQ+FD     W LGPRM  GREF+AA  +
Sbjct: 132 SPTVQVFDCRFGTWELGPRMRVGREFAAAGVV 163


>dbj|BAK03883.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 359

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 49/150 (32%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
 Frame = +2

Query: 20  LVPFFPDEISIQILARLPXXXXXXXXXXXXXWRSIL--HSPLLVAXXXXXXXXXXXXXXN 193
           L+P  PD+++IQ +A LP               ++L  H   L+A              +
Sbjct: 1   LIPVLPDDLAIQCIALLPRAAHPTLALVSRALHALLCLHPEPLLAARRRLCRSDPHIVIS 60

Query: 194 VRTHSGSSLWFPVDXXXXXXXXXXXXXXXXXXVSGAATATLGHELYLLGGSLNGIPSAVV 373
           VR    +S  F +                    S +A A  GH LYL+GGS+ G+P++ V
Sbjct: 61  VRPPYSASPRFFLLLPHPGWPPLPLPSPPIPVSSSSAVAVNGHRLYLVGGSVAGVPASSV 120

Query: 374 QIFDAASRRWSLGPRMSTGREFSAAAALNG 463
           QI D+ +R WS+GPR+S+ REF+AAA L G
Sbjct: 121 QILDSRTRSWSIGPRLSSPREFAAAAVLPG 150


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