BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027455
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002877464.1| hypothetical protein ARALYDRAFT_485002 [Arab...    60   1e-07
ref|NP_190207.1| exosome complex component RRP46 [Arabidopsis th...    60   2e-07
ref|XP_004164036.1| PREDICTED: exosome complex exonuclease RRP46...    60   2e-07
ref|XP_004150286.1| PREDICTED: exosome complex exonuclease RRP46...    60   2e-07
ref|XP_002324223.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07

>ref|XP_002877464.1| hypothetical protein ARALYDRAFT_485002 [Arabidopsis lyrata subsp.
           lyrata] gi|297323302|gb|EFH53723.1| hypothetical protein
           ARALYDRAFT_485002 [Arabidopsis lyrata subsp. lyrata]
          Length = 242

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/44 (65%), Positives = 33/44 (75%)
 Frame = +3

Query: 69  KKLQAFENLVFPNPPTSVIPKGSSSSAEEPFEHGIITSVTHGAM 200
           KK+ AF  LVFPN   SV+P+GSS +  EP EHGIITSVTHG M
Sbjct: 161 KKMTAFAYLVFPNTTLSVLPEGSSVAEGEPVEHGIITSVTHGVM 204


>ref|NP_190207.1| exosome complex component RRP46 [Arabidopsis thaliana]
           gi|79314404|ref|NP_001030817.1| exosome complex
           component RRP46 [Arabidopsis thaliana]
           gi|79314427|ref|NP_001030818.1| exosome complex
           component RRP46 [Arabidopsis thaliana]
           gi|79314448|ref|NP_001030819.1| exosome complex
           component RRP46 [Arabidopsis thaliana]
           gi|145332769|ref|NP_001078250.1| exosome complex
           component RRP46 [Arabidopsis thaliana]
           gi|334185757|ref|NP_001190019.1| exosome complex
           component RRP46 [Arabidopsis thaliana]
           gi|7799009|emb|CAB90948.1| putative protein [Arabidopsis
           thaliana] gi|27808554|gb|AAO24557.1| At3g46210
           [Arabidopsis thaliana] gi|110736314|dbj|BAF00127.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|222423954|dbj|BAH19939.1| AT3G46210 [Arabidopsis
           thaliana] gi|222424492|dbj|BAH20201.1| AT3G46210
           [Arabidopsis thaliana] gi|332644608|gb|AEE78129.1|
           exosome complex component RRP46 [Arabidopsis thaliana]
           gi|332644609|gb|AEE78130.1| exosome complex component
           RRP46 [Arabidopsis thaliana] gi|332644610|gb|AEE78131.1|
           exosome complex component RRP46 [Arabidopsis thaliana]
           gi|332644611|gb|AEE78132.1| exosome complex component
           RRP46 [Arabidopsis thaliana] gi|332644612|gb|AEE78133.1|
           exosome complex component RRP46 [Arabidopsis thaliana]
           gi|332644613|gb|AEE78134.1| exosome complex component
           RRP46 [Arabidopsis thaliana]
          Length = 239

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/44 (63%), Positives = 33/44 (75%)
 Frame = +3

Query: 69  KKLQAFENLVFPNPPTSVIPKGSSSSAEEPFEHGIITSVTHGAM 200
           KK+ AF  LVFPN   SV+P+GSS +  EP EHGIITS+THG M
Sbjct: 161 KKMTAFAYLVFPNTTLSVLPEGSSVAEGEPVEHGIITSITHGVM 204


>ref|XP_004164036.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Cucumis
           sativus]
          Length = 243

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/44 (61%), Positives = 34/44 (77%)
 Frame = +3

Query: 69  KKLQAFENLVFPNPPTSVIPKGSSSSAEEPFEHGIITSVTHGAM 200
           +K++A  +LVFPN P SV+P+GS+    EP EHGIITSVT GAM
Sbjct: 161 EKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVTQGAM 204


>ref|XP_004150286.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Cucumis
           sativus]
          Length = 243

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/44 (61%), Positives = 34/44 (77%)
 Frame = +3

Query: 69  KKLQAFENLVFPNPPTSVIPKGSSSSAEEPFEHGIITSVTHGAM 200
           +K++A  +LVFPN P SV+P+GS+    EP EHGIITSVT GAM
Sbjct: 161 EKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVTQGAM 204


>ref|XP_002324223.1| predicted protein [Populus trichocarpa] gi|222865657|gb|EEF02788.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/44 (61%), Positives = 32/44 (72%)
 Frame = +3

Query: 69  KKLQAFENLVFPNPPTSVIPKGSSSSAEEPFEHGIITSVTHGAM 200
           +K++ F  LVFPN   SV+P+GSS    EP EHGIITSVTHG M
Sbjct: 161 QKMRGFTYLVFPNSVVSVLPEGSSHVEGEPMEHGIITSVTHGVM 204