BLASTX nr result

ID: Dioscorea21_contig00027448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027448
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854...   129   3e-28
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]    79   5e-13
gb|ACN78974.1| retrotransposon protein [Glycine max] gi|22501615...    75   8e-12
ref|XP_003520335.1| PREDICTED: uncharacterized protein LOC100785...    74   2e-11
emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]    73   3e-11

>ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854728 [Vitis vinifera]
          Length = 2807

 Score =  129 bits (324), Expect = 3e-28
 Identities = 75/173 (43%), Positives = 100/173 (57%), Gaps = 3/173 (1%)
 Frame = +1

Query: 61  GVSTHSKQVLLVRK---SEGVSLVLSLTLSMANSETIDAIKSWADQFQTQLQNTLEDQAA 231
           G  T SK  L++          LVLS T  MA+S+ + A+K+  DQF+ Q     E Q  
Sbjct: 145 GADTRSKSALVLTGHFVGRTYQLVLSSTPLMADSDVLSAVKALQDQFEAQF----ESQTV 200

Query: 232 VFHSSLQKSVAALDARI*GVRLQIGGSGASNNDARISSHRQLSDNFPVSTETHILPRAMR 411
            FH  LQ+ ++ +D+R+   R Q  GS A        +   + +    S E     R M+
Sbjct: 201 SFHQILQQYMSTVDSRLEEFRSQFRGSSAGLLGPP-PAPPPVPEMGVGSNELATALRFMK 259

Query: 412 LEIPKFDGTDPDSWVFRIEEFFNFHETPTQLRLRIVSFHLEGKASAWYQWMKS 570
           +EIPKF+GTDP  WVFR+EEFF+FH TP  LRLRIVSFH+EG A+ WYQWMK+
Sbjct: 260 MEIPKFNGTDPHGWVFRVEEFFDFHGTPEPLRLRIVSFHMEGPAAGWYQWMKA 312


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score = 79.0 bits (193), Expect = 5e-13
 Identities = 47/135 (34%), Positives = 71/135 (52%)
 Frame = +1

Query: 154 ETIDAIKSWADQFQTQLQNTLEDQAAVFHSSLQKSVAALDARI*GVRLQIGGSGASNNDA 333
           E++ A+K   +Q+Q   QN    Q  V   + Q  V A + +          SG S    
Sbjct: 14  ESLAAVKQNQEQYQ---QNHNSLQQVVEGLAHQLEVVASNVQTLVQMKTKHNSGDSEGSK 70

Query: 334 RISSHRQLSDNFPVSTETHILPRAMRLEIPKFDGTDPDSWVFRIEEFFNFHETPTQLRLR 513
           R  ++    DN  + T      RA+RL+ PKF+G DP+ WV+R ++FFN+H+T    R+ 
Sbjct: 71  RQMTNPLFEDNGGIQT------RAVRLDFPKFNGEDPNGWVYRADQFFNYHQTNPHHRVL 124

Query: 514 IVSFHLEGKASAWYQ 558
           + SFH+EGKA  W+Q
Sbjct: 125 LASFHMEGKALVWFQ 139


>gb|ACN78974.1| retrotransposon protein [Glycine max] gi|225016158|gb|ACN78981.1|
           retrotransposon protein [Glycine max]
          Length = 1261

 Score = 75.1 bits (183), Expect = 8e-12
 Identities = 32/65 (49%), Positives = 47/65 (72%)
 Frame = +1

Query: 370 PVSTETHILPRAMRLEIPKFDGTDPDSWVFRIEEFFNFHETPTQLRLRIVSFHLEGKASA 549
           P +T T+   R M+LE+ +F+G+DP+ W+F+I +FF +H TP   RL I SF++EG A A
Sbjct: 50  PGATTTNPTYR-MKLEVSRFNGSDPEGWIFKITQFFEYHATPDHERLTIASFYMEGLALA 108

Query: 550 WYQWM 564
           W+QWM
Sbjct: 109 WFQWM 113


>ref|XP_003520335.1| PREDICTED: uncharacterized protein LOC100785238 [Glycine max]
          Length = 498

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/79 (43%), Positives = 49/79 (62%)
 Frame = +1

Query: 328 DARISSHRQLSDNFPVSTETHILPRAMRLEIPKFDGTDPDSWVFRIEEFFNFHETPTQLR 507
           D  IS    L    P+ +  H  PR M LE+P FDGTD  SW+ +I +FF++H TP   R
Sbjct: 39  DEVISLLHTLETASPIRSSRHQPPR-MNLEVPCFDGTDTMSWIIKISQFFDYHGTPDDER 97

Query: 508 LRIVSFHLEGKASAWYQWM 564
           L++  F+L+G A +W+QW+
Sbjct: 98  LQVAFFYLDGLALSWFQWI 116


>emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]
          Length = 2822

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 29/56 (51%), Positives = 41/56 (73%)
 Frame = +1

Query: 391 ILPRAMRLEIPKFDGTDPDSWVFRIEEFFNFHETPTQLRLRIVSFHLEGKASAWYQ 558
           I  RA+RL+ PKF+G DP  WV+R ++FFN+H+T    R+ + SFH+EGKA  W+Q
Sbjct: 49  IQTRAVRLDFPKFNGEDPSGWVYRADQFFNYHQTNPHHRVLLASFHMEGKALVWFQ 104


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