BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027446
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW74566.1| integrase [Boechera divaricarpa]                        63   2e-08
gb|AAN11196.1| Putative retroelement [Oryza sativa Japonica Grou...    63   3e-08
emb|CAE03692.2| OSJNBb0026E15.10 [Oryza sativa Japonica Group]         62   6e-08
gb|ABA94350.1| retrotransposon protein, putative, Ty1-copia subc...    61   8e-08
emb|CAH66352.1| OSIGBa0135C09.3 [Oryza sativa Indica Group]            61   8e-08

>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/54 (55%), Positives = 40/54 (74%)
 Frame = -1

Query: 394 RLCESCTHGKQRRQSFKKEDARRADQLVELIHANLCGPMQTKTPRGNQLYFLSL 233
           +LCE C +GKQ R+SF    ARRA Q +E++HA+LCGPMQT +  G++ YFL L
Sbjct: 312 KLCEGCVYGKQSRRSFPVGRARRATQYLEIVHADLCGPMQTASLGGSK-YFLML 364


>gb|AAN11196.1| Putative retroelement [Oryza sativa Japonica Group]
            gi|110288579|gb|ABG65897.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1148

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
 Frame = -1

Query: 424  KLVRGLLTPARL---CESCTHGKQRRQSFKKEDARRADQLVELIHANLCGPMQTKTPRGN 254
            +LVRGL    +L   CE+C  GKQRR SF  +    A QL+EL+H +LCGP+   TPRGN
Sbjct: 1020 ELVRGLPKVGQLKQLCEACQAGKQRRTSFPMQAEYHAWQLLELVHGDLCGPITPATPRGN 1079

Query: 253  QLYFL 239
            + + L
Sbjct: 1080 KYFML 1084


>emb|CAE03692.2| OSJNBb0026E15.10 [Oryza sativa Japonica Group]
          Length = 1449

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
 Frame = -1

Query: 427 RKLVRGL---LTPARLCESCTHGKQRRQSFKKEDARRADQLVELIHANLCGPMQTKTPRG 257
           +++VRGL       ++C+ C  GKQRR +F  +   RAD+ +EL+H +LCGP++  TP G
Sbjct: 546 QEMVRGLPLLQQVTQVCDGCLLGKQRRAAFPTQSKYRADEHLELVHGDLCGPIEPATPAG 605

Query: 256 NQLYFLSLPKHDSSFRSLQSIQT 188
           N+ YFL L    S +  L  I++
Sbjct: 606 NR-YFLLLVDDMSRYMWLTMIRS 627


>gb|ABA94350.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1449

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
 Frame = -1

Query: 427 RKLVRGL---LTPARLCESCTHGKQRRQSFKKEDARRADQLVELIHANLCGPMQTKTPRG 257
           +++VRGL       ++C+ C  GKQRR +F  +   RAD+ +EL+H +LCGP++  TP G
Sbjct: 577 QEMVRGLPLLQQVTQVCDGCLLGKQRRAAFPTQSKYRADEHLELVHGDLCGPIEPATPAG 636

Query: 256 NQLYFLSLPKHDSSFRSLQSIQT 188
           N+ YFL L    S +  L  I++
Sbjct: 637 NR-YFLLLVDDMSRYMWLTLIRS 658


>emb|CAH66352.1| OSIGBa0135C09.3 [Oryza sativa Indica Group]
          Length = 1366

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
 Frame = -1

Query: 427 RKLVRGL---LTPARLCESCTHGKQRRQSFKKEDARRADQLVELIHANLCGPMQTKTPRG 257
           +++VRGL       ++C+ C  GKQRR +F  +   RAD+ +EL+H +LCGP++  TP G
Sbjct: 479 QEMVRGLPLLQQVTQVCDGCLLGKQRRAAFPTQSKYRADEHLELVHGDLCGPIEPATPAG 538

Query: 256 NQLYFLSLPKHDSSFRSLQSIQT 188
           N+ YFL L    S +  L  I++
Sbjct: 539 NR-YFLLLVDDMSRYMWLTLIRS 560