BLASTX nr result

ID: Dioscorea21_contig00027443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027443
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY73658.1| hypothetical protein OsI_01545 [Oryza sativa Indi...    64   1e-08
ref|NP_001042820.1| Os01g0301000 [Oryza sativa Japonica Group] g...    64   1e-08
ref|XP_003567580.1| PREDICTED: pentatricopeptide repeat-containi...    64   1e-08
gb|ACN31600.1| unknown [Zea mays]                                      63   2e-08
ref|XP_002457728.1| hypothetical protein SORBIDRAFT_03g012450 [S...    62   4e-08

>gb|EAY73658.1| hypothetical protein OsI_01545 [Oryza sativa Indica Group]
          Length = 522

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/47 (63%), Positives = 37/47 (78%)
 Frame = -1

Query: 142 KKDLRPLYRRLSALGGAADGSVVKVLNKWVREGKTVTSPELIKQVKE 2
           +KD R LYRRLSALGGA +GSV +V+NKWVREG+   + +L K VKE
Sbjct: 51  EKDARSLYRRLSALGGAGEGSVSRVMNKWVREGREARAADLAKYVKE 97


>ref|NP_001042820.1| Os01g0301000 [Oryza sativa Japonica Group]
           gi|57899052|dbj|BAD87826.1| putative DNA-binding protein
           [Oryza sativa Japonica Group]
           gi|113532351|dbj|BAF04734.1| Os01g0301000 [Oryza sativa
           Japonica Group] gi|215694668|dbj|BAG89859.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215706899|dbj|BAG93359.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 522

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/47 (63%), Positives = 37/47 (78%)
 Frame = -1

Query: 142 KKDLRPLYRRLSALGGAADGSVVKVLNKWVREGKTVTSPELIKQVKE 2
           +KD R LYRRLSALGGA +GSV +V+NKWVREG+   + +L K VKE
Sbjct: 51  EKDARSLYRRLSALGGAGEGSVSRVMNKWVREGREARAADLAKYVKE 97


>ref|XP_003567580.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 545

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/46 (67%), Positives = 36/46 (78%)
 Frame = -1

Query: 139 KDLRPLYRRLSALGGAADGSVVKVLNKWVREGKTVTSPELIKQVKE 2
           KD RPLYRRLSALG A +GSV +VLNKWVREG+   S +L + VKE
Sbjct: 75  KDSRPLYRRLSALGNAGEGSVSRVLNKWVREGREARSVDLERYVKE 120


>gb|ACN31600.1| unknown [Zea mays]
          Length = 515

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/47 (65%), Positives = 36/47 (76%)
 Frame = -1

Query: 142 KKDLRPLYRRLSALGGAADGSVVKVLNKWVREGKTVTSPELIKQVKE 2
           K+D R LYRRLSALG A +GSV +VLNKWVREG    S +L+K VKE
Sbjct: 44  KQDPRLLYRRLSALGSAGEGSVSRVLNKWVREGGATRSDDLVKHVKE 90


>ref|XP_002457728.1| hypothetical protein SORBIDRAFT_03g012450 [Sorghum bicolor]
           gi|241929703|gb|EES02848.1| hypothetical protein
           SORBIDRAFT_03g012450 [Sorghum bicolor]
          Length = 530

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/47 (68%), Positives = 36/47 (76%)
 Frame = -1

Query: 142 KKDLRPLYRRLSALGGAADGSVVKVLNKWVREGKTVTSPELIKQVKE 2
           KKD + LYRRLSALG A +GSV +VLNKWVREG    S EL+K VKE
Sbjct: 60  KKDPKLLYRRLSALGIAGEGSVSRVLNKWVREGGAPRSEELVKHVKE 106


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