BLASTX nr result

ID: Dioscorea21_contig00027442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027442
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002457728.1| hypothetical protein SORBIDRAFT_03g012450 [S...    66   3e-09
gb|ACN31600.1| unknown [Zea mays]                                      65   6e-09
gb|EAY73658.1| hypothetical protein OsI_01545 [Oryza sativa Indi...    64   1e-08
ref|NP_001042820.1| Os01g0301000 [Oryza sativa Japonica Group] g...    64   1e-08
ref|XP_003567580.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08

>ref|XP_002457728.1| hypothetical protein SORBIDRAFT_03g012450 [Sorghum bicolor]
           gi|241929703|gb|EES02848.1| hypothetical protein
           SORBIDRAFT_03g012450 [Sorghum bicolor]
          Length = 530

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/63 (57%), Positives = 44/63 (69%)
 Frame = -1

Query: 190 TASSLVSAPESAPAVVKKDLRPLYRRLSALGGAPDGNVVKVLNKWVREGKTVTSPELIKQ 11
           TA++  SA  +A    KKD + LYRRLSALG A +G+V +VLNKWVREG    S EL+K 
Sbjct: 44  TAAATPSASAAAAKPAKKDPKLLYRRLSALGIAGEGSVSRVLNKWVREGGAPRSEELVKH 103

Query: 10  VKE 2
           VKE
Sbjct: 104 VKE 106


>gb|ACN31600.1| unknown [Zea mays]
          Length = 515

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/59 (59%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
 Frame = -1

Query: 172 SAPESAPAV--VKKDLRPLYRRLSALGGAPDGNVVKVLNKWVREGKTVTSPELIKQVKE 2
           +AP SA A    K+D R LYRRLSALG A +G+V +VLNKWVREG    S +L+K VKE
Sbjct: 32  TAPSSAAAAKPAKQDPRLLYRRLSALGSAGEGSVSRVLNKWVREGGATRSDDLVKHVKE 90


>gb|EAY73658.1| hypothetical protein OsI_01545 [Oryza sativa Indica Group]
          Length = 522

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/56 (57%), Positives = 41/56 (73%)
 Frame = -1

Query: 169 APESAPAVVKKDLRPLYRRLSALGGAPDGNVVKVLNKWVREGKTVTSPELIKQVKE 2
           A  +A A  +KD R LYRRLSALGGA +G+V +V+NKWVREG+   + +L K VKE
Sbjct: 42  AKTAAAAGEEKDARSLYRRLSALGGAGEGSVSRVMNKWVREGREARAADLAKYVKE 97


>ref|NP_001042820.1| Os01g0301000 [Oryza sativa Japonica Group]
           gi|57899052|dbj|BAD87826.1| putative DNA-binding protein
           [Oryza sativa Japonica Group]
           gi|113532351|dbj|BAF04734.1| Os01g0301000 [Oryza sativa
           Japonica Group] gi|215694668|dbj|BAG89859.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215706899|dbj|BAG93359.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 522

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/56 (57%), Positives = 41/56 (73%)
 Frame = -1

Query: 169 APESAPAVVKKDLRPLYRRLSALGGAPDGNVVKVLNKWVREGKTVTSPELIKQVKE 2
           A  +A A  +KD R LYRRLSALGGA +G+V +V+NKWVREG+   + +L K VKE
Sbjct: 42  AKTAAAAGEEKDARSLYRRLSALGGAGEGSVSRVMNKWVREGREARAADLAKYVKE 97


>ref|XP_003567580.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 545

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/52 (61%), Positives = 38/52 (73%)
 Frame = -1

Query: 157 APAVVKKDLRPLYRRLSALGGAPDGNVVKVLNKWVREGKTVTSPELIKQVKE 2
           A   V KD RPLYRRLSALG A +G+V +VLNKWVREG+   S +L + VKE
Sbjct: 69  ANKAVTKDSRPLYRRLSALGNAGEGSVSRVLNKWVREGREARSVDLERYVKE 120


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