BLASTX nr result

ID: Dioscorea21_contig00027425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027425
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002454535.1| hypothetical protein SORBIDRAFT_04g032880 [S...    88   6e-16
ref|NP_001136857.1| uncharacterized protein LOC100217009 [Zea ma...    88   8e-16
ref|XP_003570029.1| PREDICTED: uncharacterized protein LOC100824...    87   1e-15
ref|NP_001047634.1| Os02g0658300 [Oryza sativa Japonica Group] g...    86   2e-15
ref|XP_002332927.1| predicted protein [Populus trichocarpa] gi|2...    78   9e-13

>ref|XP_002454535.1| hypothetical protein SORBIDRAFT_04g032880 [Sorghum bicolor]
           gi|241934366|gb|EES07511.1| hypothetical protein
           SORBIDRAFT_04g032880 [Sorghum bicolor]
          Length = 98

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 53/80 (66%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
 Frame = -2

Query: 242 AHIARSPPAARRFSSALSPACRRSLFLSRSPVELGCYDG-SLLPLHSAVAAARLTSRLST 66
           A  +RS P+A R ++A + A R +   SR PVELGC  G SLLPLHSAVAAARLTSRLST
Sbjct: 20  AAASRSAPSAARAAAAAAAAGRGASCFSRVPVELGCCAGLSLLPLHSAVAAARLTSRLST 79

Query: 65  TARSCRDLSQGTLCCTYPGL 6
            A SCR LSQG LC TYPGL
Sbjct: 80  -ASSCRALSQGILCRTYPGL 98


>ref|NP_001136857.1| uncharacterized protein LOC100217009 [Zea mays]
           gi|194697378|gb|ACF82773.1| unknown [Zea mays]
           gi|195653989|gb|ACG46462.1| hypothetical protein [Zea
           mays] gi|413923344|gb|AFW63276.1| hypothetical protein
           ZEAMMB73_841405 [Zea mays] gi|413923345|gb|AFW63277.1|
           hypothetical protein ZEAMMB73_841405 [Zea mays]
          Length = 94

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 53/80 (66%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
 Frame = -2

Query: 242 AHIARSPPAARRFSSALSPACRRSLFLSRSPVELGCYDG-SLLPLHSAVAAARLTSRLST 66
           A   RS P+A R ++A      R+   SR PVELGC  G SLLPLHSAVAAARLTSRLST
Sbjct: 20  AAATRSAPSAARAAAA----AHRASSFSRMPVELGCCAGLSLLPLHSAVAAARLTSRLST 75

Query: 65  TARSCRDLSQGTLCCTYPGL 6
            A SCR LSQG LCCTYPGL
Sbjct: 76  -ASSCRALSQGILCCTYPGL 94


>ref|XP_003570029.1| PREDICTED: uncharacterized protein LOC100824083 [Brachypodium
           distachyon]
          Length = 92

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 53/87 (60%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
 Frame = -2

Query: 263 ALPALLRAHIARSPPAARRFSSALSPACRRSLFLSRSPVELGCYDG-SLLPLHSAVAAAR 87
           A  A  R+   RS P+A R ++      RR+  +SR PVELGC  G SLLPLHSAVAAAR
Sbjct: 12  AASAACRSAAPRSMPSAGRSTA------RRAPLISRLPVELGCCAGVSLLPLHSAVAAAR 65

Query: 86  LTSRLSTTARSCRDLSQGTLCCTYPGL 6
           LTSRLST +RSC  LSQG LC TYPGL
Sbjct: 66  LTSRLSTASRSCCALSQGILCRTYPGL 92


>ref|NP_001047634.1| Os02g0658300 [Oryza sativa Japonica Group]
           gi|113537165|dbj|BAF09548.1| Os02g0658300 [Oryza sativa
           Japonica Group] gi|125540562|gb|EAY86957.1| hypothetical
           protein OsI_08346 [Oryza sativa Indica Group]
           gi|125583141|gb|EAZ24072.1| hypothetical protein
           OsJ_07806 [Oryza sativa Japonica Group]
           gi|215707251|dbj|BAG93711.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 89

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 53/81 (65%), Positives = 56/81 (69%), Gaps = 10/81 (12%)
 Frame = -2

Query: 218 AARRFSSALSPACRRSL---------FLSRSPVELGCYDG-SLLPLHSAVAAARLTSRLS 69
           AAR  SSA   A  RS+          +SR PVELGC  G SLLPLHSAVAAARLTSRLS
Sbjct: 9   AARMASSACRSAASRSIPSAARRGAPRISRLPVELGCSAGLSLLPLHSAVAAARLTSRLS 68

Query: 68  TTARSCRDLSQGTLCCTYPGL 6
           T +RSC  LSQGTLC TYPGL
Sbjct: 69  TASRSCCALSQGTLCRTYPGL 89


>ref|XP_002332927.1| predicted protein [Populus trichocarpa] gi|222833694|gb|EEE72171.1|
           predicted protein [Populus trichocarpa]
          Length = 110

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 44/73 (60%), Positives = 50/73 (68%)
 Frame = -2

Query: 224 PPAARRFSSALSPACRRSLFLSRSPVELGCYDGSLLPLHSAVAAARLTSRLSTTARSCRD 45
           PP + RFS             SR+P ELGC   SLLPLHSAVAA+R+TS LSTT+R+ R 
Sbjct: 51  PPTSSRFS------------FSRAPCELGCVQ-SLLPLHSAVAASRMTSCLSTTSRNFRA 97

Query: 44  LSQGTLCCTYPGL 6
           LSQGTLCCT PGL
Sbjct: 98  LSQGTLCCTSPGL 110


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