BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027394
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu...   151   5e-35
ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containin...   143   2e-32
ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-29
ref|XP_002529054.1| RNA binding protein, putative [Ricinus commu...   129   4e-28
emb|CBI28414.3| unnamed protein product [Vitis vinifera]              114   7e-24

>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
           gi|223525472|gb|EEF28048.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 578

 Score =  151 bits (382), Expect = 5e-35
 Identities = 74/181 (40%), Positives = 118/181 (65%), Gaps = 4/181 (2%)
 Frame = +2

Query: 2   SAASDVPHQFGHYPNASVASRSFPSPLTLHVPAPFWDSD---QQHSMHNLDYVPCRYTVS 172
           S  SD+P QF  +  AS    S P+  +    + +WD+     Q  + NLD+    Y+ +
Sbjct: 80  SPVSDIPLQFTPFSPASAHPISSPAA-SRRTASAYWDAQVTGDQQQVPNLDFGSPGYSDT 138

Query: 173 VGEDYGLGNRAQFIGLEEQMDQANTMGANFSNNFYYHDTAIGGALTSKTSRRSPGLPDYP 352
           V EDY L N  QF+ L++Q + A+++ ++FS+N++Y + A+G     +T+RRSP LP++P
Sbjct: 139 VPEDYRLQNHMQFLTLDDQFEFAHSVNSDFSSNYFYSEPALG----PRTNRRSPSLPEFP 194

Query: 353 IKACHYFYRGYCKHGSNCRYFHDQPLQDGYSQVYSQSLNE-AGEEHGFSAGSLDQLELEI 529
           +K CHYF +GYCKHG+NCRY H  P+ +G+SQ++S   N+ + +EH  S GSL++LE+E+
Sbjct: 195 LKICHYFSKGYCKHGNNCRYVHGHPMPEGFSQIFSTKSNDFSNDEHVVSPGSLEKLEMEL 254

Query: 530 A 532
           A
Sbjct: 255 A 255


>ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           [Vitis vinifera]
          Length = 572

 Score =  143 bits (360), Expect = 2e-32
 Identities = 74/181 (40%), Positives = 118/181 (65%), Gaps = 5/181 (2%)
 Frame = +2

Query: 2   SAASDVPHQFGHYPNASVASRSFPSPLTLHVPAPFWD---SDQQHSMHNL-DYVPCRYTV 169
           S  SD+P QF  +  AS  +R FPSP   +    +WD   +  Q  +H L D+VP  Y+ 
Sbjct: 81  SPVSDLPLQFTPFSPAS--ARPFPSPRPGN---SYWDPQVNGDQQQVHKLGDFVPQGYSD 135

Query: 170 SVGEDYGLGNRAQFIGLEEQMDQANTMGANFSNNFYYHDTAIGGALTSKTSRRSPGLPDY 349
           S+ +D+ L ++  F+ +E+Q++  N++G+ FS ++YY + A    L ++ SRRSP LP++
Sbjct: 136 SLPDDFRLQSQIHFLAMEDQLE--NSVGSEFSGSYYYAEQA----LNTRISRRSPSLPEF 189

Query: 350 PIKACHYFYRGYCKHGSNCRYFHDQPLQDGYSQVYSQSLNE-AGEEHGFSAGSLDQLELE 526
           P+K CHYF +G+CKHG++CRYFH  P+ + +SQ++S   NE   ++H F  GSL++LELE
Sbjct: 190 PLKVCHYFNKGFCKHGNSCRYFHGHPMLESFSQIFSPGANELPNDDHVFPPGSLEKLELE 249

Query: 527 I 529
           +
Sbjct: 250 L 250


>ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|222861286|gb|EEE98828.1|
           predicted protein [Populus trichocarpa]
          Length = 554

 Score =  132 bits (332), Expect = 3e-29
 Identities = 69/174 (39%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
 Frame = +2

Query: 11  SDVPHQFGHYPNASVASRSFPSPLTLHVPAPFWDSDQQHSMHNLDYVPCRYTVSVGEDYG 190
           SDV  QF   PN +V+S    SP+ +     FWD+                      DY 
Sbjct: 83  SDVHLQF--IPNTAVSSHPISSPIKIRTAGSFWDAQVT-------------------DYR 121

Query: 191 LGNRAQFIGLEEQMDQANTMGANFSNNFYYHDTAIGGALTSKTSRRSPGLPDYPIKACHY 370
           L N+ QF+  ++Q++  N+   +FS++++Y + A+G     +TSRRSP LP++P+K CHY
Sbjct: 122 LQNQMQFLTSDDQLEFVNS---DFSSSYFYPEPALG----PRTSRRSPSLPEFPVKICHY 174

Query: 371 FYRGYCKHGSNCRYFHDQPLQDGYSQVYSQSLNE-AGEEHGFSAGSLDQLELEI 529
           F +G+CKHG+NCRYFH  P+ + +SQ+ S + NE A +EH  S GSL++LELE+
Sbjct: 175 FNKGFCKHGNNCRYFHGHPMPESFSQILSLNSNEIANDEHFISPGSLEKLELEL 228


>ref|XP_002529054.1| RNA binding protein, putative [Ricinus communis]
           gi|223531534|gb|EEF33365.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 551

 Score =  129 bits (323), Expect = 4e-28
 Identities = 72/175 (41%), Positives = 105/175 (60%)
 Frame = +2

Query: 5   AASDVPHQFGHYPNASVASRSFPSPLTLHVPAPFWDSDQQHSMHNLDYVPCRYTVSVGED 184
           A S+   QF  +  + V+SRS+ SP    VP+ +W+S Q  S H+ D+VP  Y  S+ E 
Sbjct: 82  AVSEFSSQFRAF--SPVSSRSYLSPQHFRVPSTYWES-QVASKHSSDFVPMTYQDSMTE- 137

Query: 185 YGLGNRAQFIGLEEQMDQANTMGANFSNNFYYHDTAIGGALTSKTSRRSPGLPDYPIKAC 364
             L N+AQF+ LE+Q++  N   A F ++ +Y D A+G +  ++  RR   L +  +K C
Sbjct: 138 --LQNQAQFLSLEDQLESVNLGNAGFPSDLFYSDAALG-SFRARAGRRYSSLNENSMKIC 194

Query: 365 HYFYRGYCKHGSNCRYFHDQPLQDGYSQVYSQSLNEAGEEHGFSAGSLDQLELEI 529
           HYF +GYCKHGSNCRYFH Q      S  + ++ +   E+  FS GSL++LELEI
Sbjct: 195 HYFNKGYCKHGSNCRYFHGQ-----ISDSFPRTFDAINEDQIFSPGSLEKLELEI 244


>emb|CBI28414.3| unnamed protein product [Vitis vinifera]
          Length = 525

 Score =  114 bits (286), Expect = 7e-24
 Identities = 49/112 (43%), Positives = 81/112 (72%), Gaps = 1/112 (0%)
 Frame = +2

Query: 197 NRAQFIGLEEQMDQANTMGANFSNNFYYHDTAIGGALTSKTSRRSPGLPDYPIKACHYFY 376
           ++  F+ +E+Q++  N++G+ FS ++YY + A    L ++ SRRSP LP++P+K CHYF 
Sbjct: 98  SQIHFLAMEDQLE--NSVGSEFSGSYYYAEQA----LNTRISRRSPSLPEFPLKVCHYFN 151

Query: 377 RGYCKHGSNCRYFHDQPLQDGYSQVYSQSLNE-AGEEHGFSAGSLDQLELEI 529
           +G+CKHG++CRYFH  P+ + +SQ++S   NE   ++H F  GSL++LELE+
Sbjct: 152 KGFCKHGNSCRYFHGHPMLESFSQIFSPGANELPNDDHVFPPGSLEKLELEL 203