BLASTX nr result

ID: Dioscorea21_contig00027383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027383
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550025.1| PREDICTED: 60S ribosomal protein L51, mitoch...   225   2e-57
ref|XP_003627415.1| Mitochondrial ribosomal protein L43 [Medicag...   222   2e-56
gb|AFK38190.1| unknown [Medicago truncatula]                          219   2e-55
ref|XP_002276080.1| PREDICTED: 60S ribosomal protein L51, mitoch...   217   7e-55
ref|XP_002876517.1| mitochondrial ribosomal protein L51/S25/CI-B...   216   2e-54

>ref|XP_003550025.1| PREDICTED: 60S ribosomal protein L51, mitochondrial-like [Glycine
           max]
          Length = 119

 Score =  225 bits (574), Expect = 2e-57
 Identities = 104/119 (87%), Positives = 115/119 (96%)
 Frame = +3

Query: 3   MALRGVWQLQKLVVSYCDWGGSSRGIRAFMESNLPTLKEKNPQLDVVTELIRGQHPHLKA 182
           MALRGVWQL KL+VSYC+WGGSSRGIRAFMES+LPT KEKNPQL+VVTELIRGQHPHLKA
Sbjct: 1   MALRGVWQLNKLIVSYCNWGGSSRGIRAFMESHLPTFKEKNPQLEVVTELIRGQHPHLKA 60

Query: 183 FYKNHNQRVVCVKNMTPEEILLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTALKF 359
           +YKN NQRV+CVKNM PE+ILLHATRLRNALGRKV+KLRTRHVTKHPSVQGTWTTA+++
Sbjct: 61  YYKNKNQRVICVKNMDPEDILLHATRLRNALGRKVVKLRTRHVTKHPSVQGTWTTAVEY 119


>ref|XP_003627415.1| Mitochondrial ribosomal protein L43 [Medicago truncatula]
           gi|355521437|gb|AET01891.1| Mitochondrial ribosomal
           protein L43 [Medicago truncatula]
          Length = 119

 Score =  222 bits (566), Expect = 2e-56
 Identities = 106/119 (89%), Positives = 112/119 (94%)
 Frame = +3

Query: 3   MALRGVWQLQKLVVSYCDWGGSSRGIRAFMESNLPTLKEKNPQLDVVTELIRGQHPHLKA 182
           MALRGVWQL+KLVVS+ DWGGSSRGIRAFMES+LP  KE NPQL+V TE+IRGQHPHLKA
Sbjct: 1   MALRGVWQLKKLVVSFSDWGGSSRGIRAFMESHLPAFKEANPQLEVDTEMIRGQHPHLKA 60

Query: 183 FYKNHNQRVVCVKNMTPEEILLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTALKF 359
           FYKNHN RVVCVKNM PEEILLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTALK+
Sbjct: 61  FYKNHNDRVVCVKNMDPEEILLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTALKY 119


>gb|AFK38190.1| unknown [Medicago truncatula]
          Length = 119

 Score =  219 bits (558), Expect = 2e-55
 Identities = 105/119 (88%), Positives = 111/119 (93%)
 Frame = +3

Query: 3   MALRGVWQLQKLVVSYCDWGGSSRGIRAFMESNLPTLKEKNPQLDVVTELIRGQHPHLKA 182
           MALRGVWQL+KLVVS+ DWGGSSRGIRAFMES+LP  KE NPQL+V TE+IRGQHPHLKA
Sbjct: 1   MALRGVWQLKKLVVSFSDWGGSSRGIRAFMESHLPAFKEANPQLEVDTEMIRGQHPHLKA 60

Query: 183 FYKNHNQRVVCVKNMTPEEILLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTALKF 359
           FYKN N RVVCVKNM PEEILLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTALK+
Sbjct: 61  FYKNRNDRVVCVKNMDPEEILLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTALKY 119


>ref|XP_002276080.1| PREDICTED: 60S ribosomal protein L51, mitochondrial isoform 1
           [Vitis vinifera] gi|225434100|ref|XP_002276106.1|
           PREDICTED: 60S ribosomal protein L51, mitochondrial
           isoform 2 [Vitis vinifera] gi|147861396|emb|CAN83982.1|
           hypothetical protein VITISV_001097 [Vitis vinifera]
           gi|296084281|emb|CBI24669.3| unnamed protein product
           [Vitis vinifera]
          Length = 119

 Score =  217 bits (553), Expect = 7e-55
 Identities = 100/118 (84%), Positives = 111/118 (94%)
 Frame = +3

Query: 3   MALRGVWQLQKLVVSYCDWGGSSRGIRAFMESNLPTLKEKNPQLDVVTELIRGQHPHLKA 182
           MALRGVWQLQKL+VSY DWGGSSRGIRAFMES+LP  KE NPQL+VVTELIRGQHPHLK 
Sbjct: 1   MALRGVWQLQKLIVSYSDWGGSSRGIRAFMESHLPAFKESNPQLEVVTELIRGQHPHLKG 60

Query: 183 FYKNHNQRVVCVKNMTPEEILLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTALK 356
           FYKN N+RV+CVKNMTPE++L HATRLRNALGRKV+KL+TRHVTKHPSVQGTWTTA++
Sbjct: 61  FYKNKNERVICVKNMTPEDVLHHATRLRNALGRKVLKLKTRHVTKHPSVQGTWTTAMR 118


>ref|XP_002876517.1| mitochondrial ribosomal protein L51/S25/CI-B8 family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297322355|gb|EFH52776.1| mitochondrial ribosomal
           protein L51/S25/CI-B8 family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 119

 Score =  216 bits (550), Expect = 2e-54
 Identities = 101/119 (84%), Positives = 112/119 (94%)
 Frame = +3

Query: 3   MALRGVWQLQKLVVSYCDWGGSSRGIRAFMESNLPTLKEKNPQLDVVTELIRGQHPHLKA 182
           MALRGVWQL+KLVVSYC+WGGSSRGIRAFMES LP LKEKNPQL+VVTEL RGQHP+LK 
Sbjct: 1   MALRGVWQLKKLVVSYCNWGGSSRGIRAFMESELPALKEKNPQLEVVTELSRGQHPYLKG 60

Query: 183 FYKNHNQRVVCVKNMTPEEILLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTALKF 359
            Y+N N+RVVCVKNM PEE+LL+ATRLRN+LGRKV+KLRTRHVTKHPSVQGTWTTA+KF
Sbjct: 61  IYRNRNERVVCVKNMDPEEVLLNATRLRNSLGRKVVKLRTRHVTKHPSVQGTWTTAVKF 119


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