BLASTX nr result

ID: Dioscorea21_contig00027378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027378
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   224   6e-57
emb|CBI32069.3| unnamed protein product [Vitis vinifera]              224   6e-57
ref|XP_004157336.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   220   8e-56
ref|XP_004143826.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   220   8e-56
ref|XP_002520197.1| helicase, putative [Ricinus communis] gi|223...   220   1e-55

>ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
           chloroplastic-like [Vitis vinifera]
          Length = 1174

 Score =  224 bits (571), Expect = 6e-57
 Identities = 110/121 (90%), Positives = 115/121 (95%)
 Frame = -2

Query: 363 LKALSNQKFRDFRKTFGETNVGLLTGDSAVNKDAHVLIMTTEILRNMLYQSIGTISSGSR 184
           LKALSNQKFR+FR+TFG+ NVGLLTGDSAVNKDA VLIMTTEILRNMLYQS+G +SSGS 
Sbjct: 208 LKALSNQKFREFRETFGDNNVGLLTGDSAVNKDAQVLIMTTEILRNMLYQSVGMVSSGSG 267

Query: 183 LFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIEQIHGK 4
           LFHVDVIVLDEVHYLSDI RGTVWEEIVIYCPKEVQLICLSATVANPDELAGWI QIHGK
Sbjct: 268 LFHVDVIVLDEVHYLSDIYRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWISQIHGK 327

Query: 3   T 1
           T
Sbjct: 328 T 328


>emb|CBI32069.3| unnamed protein product [Vitis vinifera]
          Length = 1064

 Score =  224 bits (571), Expect = 6e-57
 Identities = 110/121 (90%), Positives = 115/121 (95%)
 Frame = -2

Query: 363 LKALSNQKFRDFRKTFGETNVGLLTGDSAVNKDAHVLIMTTEILRNMLYQSIGTISSGSR 184
           LKALSNQKFR+FR+TFG+ NVGLLTGDSAVNKDA VLIMTTEILRNMLYQS+G +SSGS 
Sbjct: 98  LKALSNQKFREFRETFGDNNVGLLTGDSAVNKDAQVLIMTTEILRNMLYQSVGMVSSGSG 157

Query: 183 LFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIEQIHGK 4
           LFHVDVIVLDEVHYLSDI RGTVWEEIVIYCPKEVQLICLSATVANPDELAGWI QIHGK
Sbjct: 158 LFHVDVIVLDEVHYLSDIYRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWISQIHGK 217

Query: 3   T 1
           T
Sbjct: 218 T 218


>ref|XP_004157336.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
           chloroplastic-like [Cucumis sativus]
          Length = 1168

 Score =  220 bits (561), Expect = 8e-56
 Identities = 109/121 (90%), Positives = 115/121 (95%)
 Frame = -2

Query: 363 LKALSNQKFRDFRKTFGETNVGLLTGDSAVNKDAHVLIMTTEILRNMLYQSIGTISSGSR 184
           LKALSNQKFR+FR+TFG++NVGLLTGDSAVNKDA VLIMTTEILRNMLYQS+G  +S S 
Sbjct: 211 LKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASG 270

Query: 183 LFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIEQIHGK 4
           LFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWI QIHGK
Sbjct: 271 LFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGK 330

Query: 3   T 1
           T
Sbjct: 331 T 331


>ref|XP_004143826.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           ISE2, chloroplastic-like [Cucumis sativus]
          Length = 1193

 Score =  220 bits (561), Expect = 8e-56
 Identities = 109/121 (90%), Positives = 115/121 (95%)
 Frame = -2

Query: 363 LKALSNQKFRDFRKTFGETNVGLLTGDSAVNKDAHVLIMTTEILRNMLYQSIGTISSGSR 184
           LKALSNQKFR+FR+TFG++NVGLLTGDSAVNKDA VLIMTTEILRNMLYQS+G  +S S 
Sbjct: 236 LKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASG 295

Query: 183 LFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIEQIHGK 4
           LFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWI QIHGK
Sbjct: 296 LFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGK 355

Query: 3   T 1
           T
Sbjct: 356 T 356


>ref|XP_002520197.1| helicase, putative [Ricinus communis] gi|223540689|gb|EEF42252.1|
           helicase, putative [Ricinus communis]
          Length = 1161

 Score =  220 bits (560), Expect = 1e-55
 Identities = 107/121 (88%), Positives = 115/121 (95%)
 Frame = -2

Query: 363 LKALSNQKFRDFRKTFGETNVGLLTGDSAVNKDAHVLIMTTEILRNMLYQSIGTISSGSR 184
           LKALSNQKFRDFR+TFG+ NVGLLTGDSAVNKDA VLIMTTEILRNMLYQSIG +SSGS 
Sbjct: 196 LKALSNQKFRDFRETFGDENVGLLTGDSAVNKDAQVLIMTTEILRNMLYQSIGMVSSGSG 255

Query: 183 LFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIEQIHGK 4
           LFHVDVIVLDEVH+LSDISRGTVWEEIVIYCPK+VQLICLSATV NP+ELAGWI ++HGK
Sbjct: 256 LFHVDVIVLDEVHFLSDISRGTVWEEIVIYCPKKVQLICLSATVKNPEELAGWINEVHGK 315

Query: 3   T 1
           T
Sbjct: 316 T 316


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