BLASTX nr result

ID: Dioscorea21_contig00027372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027372
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275084.1| PREDICTED: RING-H2 finger protein ATL72 [Vit...   194   5e-48
ref|XP_002520866.1| RING-H2 finger protein ATL3C, putative [Rici...   193   1e-47
ref|XP_003528016.1| PREDICTED: RING-H2 finger protein ATL72-like...   193   1e-47
ref|XP_002323073.1| predicted protein [Populus trichocarpa] gi|2...   193   1e-47
ref|XP_003523278.1| PREDICTED: RING-H2 finger protein ATL72-like...   192   2e-47

>ref|XP_002275084.1| PREDICTED: RING-H2 finger protein ATL72 [Vitis vinifera]
           gi|147769463|emb|CAN70348.1| hypothetical protein
           VITISV_012580 [Vitis vinifera]
           gi|297736494|emb|CBI25365.3| unnamed protein product
           [Vitis vinifera]
          Length = 197

 Score =  194 bits (494), Expect = 5e-48
 Identities = 99/148 (66%), Positives = 108/148 (72%), Gaps = 4/148 (2%)
 Frame = +3

Query: 3   NFDTNMVXXXXXXXXXXXXXXGLNSIVRCALRCGRRIAFETPEETAARLAGTGLKKRALR 182
           NFDTNMV              GLNSIVRCALRC RR+AFET +ETAARLA TGLKK ALR
Sbjct: 36  NFDTNMVIILAALLCALICALGLNSIVRCALRCSRRLAFETADETAARLAATGLKKSALR 95

Query: 183 QIPVAVYGPEAGILATDCPICLGEFADGEKVRVLPKCNHGFHVRCIDTWLSSHSSCPTCR 362
           QIPVAVYG    I ATDCPICLGEF  G+KVRVLPKC+HGFH++CIDTWL SHSSCPTCR
Sbjct: 96  QIPVAVYGSGTNIPATDCPICLGEFEQGDKVRVLPKCHHGFHMKCIDTWLVSHSSCPTCR 155

Query: 363 HSLLDR----TAVEGPPETGGDAPVPAP 434
           HSLL+      AV+   +TG   P  AP
Sbjct: 156 HSLLEHPPASDAVDVHVDTGIRHPGNAP 183


>ref|XP_002520866.1| RING-H2 finger protein ATL3C, putative [Ricinus communis]
           gi|223539997|gb|EEF41575.1| RING-H2 finger protein
           ATL3C, putative [Ricinus communis]
          Length = 208

 Score =  193 bits (491), Expect = 1e-47
 Identities = 96/142 (67%), Positives = 103/142 (72%), Gaps = 1/142 (0%)
 Frame = +3

Query: 3   NFDTNMVXXXXXXXXXXXXXXGLNSIVRCALRCGRRIAFETPEETAARLAGTGLKKRALR 182
           NFDTNMV              GLNSIVRCALRC RR AFETP+E AARLA TGLKK ALR
Sbjct: 38  NFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETPDEAAARLAATGLKKSALR 97

Query: 183 QIPVAVYGPEA-GILATDCPICLGEFADGEKVRVLPKCNHGFHVRCIDTWLSSHSSCPTC 359
           QIPV +YG     I+ATDC ICLGEF+DGEKVRVLPKCNHGFHVRCIDTWL SHSSCPTC
Sbjct: 98  QIPVVIYGAAGIQIIATDCAICLGEFSDGEKVRVLPKCNHGFHVRCIDTWLGSHSSCPTC 157

Query: 360 RHSLLDRTAVEGPPETGGDAPV 425
           R SLL++ A      T  D  +
Sbjct: 158 RQSLLEQPAPGNSDATEPDVEI 179


>ref|XP_003528016.1| PREDICTED: RING-H2 finger protein ATL72-like [Glycine max]
          Length = 198

 Score =  193 bits (490), Expect = 1e-47
 Identities = 94/132 (71%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
 Frame = +3

Query: 3   NFDTNMVXXXXXXXXXXXXXXGLNSIVRCALRCGRRIAFETPEETAARLAGTGLKKRALR 182
           NFDTNMV              GLNSIVRCALRC RR AFETPEETAARL   GLKK AL 
Sbjct: 34  NFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETPEETAARLVAKGLKKSALH 93

Query: 183 QIPVAVYGP-EAGILATDCPICLGEFADGEKVRVLPKCNHGFHVRCIDTWLSSHSSCPTC 359
           QIP+ VYG   A I ATDCPICLGEF DGEKVRVLPKCNHGFHVRCIDTWL SHSSCP C
Sbjct: 94  QIPIVVYGSGSASIAATDCPICLGEFVDGEKVRVLPKCNHGFHVRCIDTWLLSHSSCPNC 153

Query: 360 RHSLLDRTAVEG 395
           R SLL+   + G
Sbjct: 154 RQSLLEHPTISG 165


>ref|XP_002323073.1| predicted protein [Populus trichocarpa] gi|222867703|gb|EEF04834.1|
           predicted protein [Populus trichocarpa]
          Length = 186

 Score =  193 bits (490), Expect = 1e-47
 Identities = 96/142 (67%), Positives = 100/142 (70%), Gaps = 2/142 (1%)
 Frame = +3

Query: 3   NFDTNMVXXXXXXXXXXXXXXGLNSIVRCALRCGRRIAFETPEETAARLAGTGLKKRALR 182
           NFDTNMV              GLNSIVRC LRC  R A ET EE AARLA TGLKKR LR
Sbjct: 30  NFDTNMVIILAALLCALIGALGLNSIVRCLLRCSSRFALETTEEAAARLAATGLKKRDLR 89

Query: 183 QIPVAVYGPEAGILATDCPICLGEFADGEKVRVLPKCNHGFHVRCIDTWLSSHSSCPTCR 362
           QIPVA+YG    I AT+CPICLGEF DGEKVRVLPKCNHGFHVRCIDTWL SHSSCP CR
Sbjct: 90  QIPVAIYGAGGSISATECPICLGEFVDGEKVRVLPKCNHGFHVRCIDTWLLSHSSCPNCR 149

Query: 363 HSLLDRTAVEGPPE--TGGDAP 422
           HSLL+ T   G  +  TG   P
Sbjct: 150 HSLLEHTTDSGAAQEVTGAARP 171


>ref|XP_003523278.1| PREDICTED: RING-H2 finger protein ATL72-like [Glycine max]
          Length = 216

 Score =  192 bits (488), Expect = 2e-47
 Identities = 94/132 (71%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
 Frame = +3

Query: 3   NFDTNMVXXXXXXXXXXXXXXGLNSIVRCALRCGRRIAFETPEETAARLAGTGLKKRALR 182
           NFDTNMV              GLNSIVRCALRC RR AFETPEETAARL   GLKK AL 
Sbjct: 34  NFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETPEETAARLVAKGLKKSALH 93

Query: 183 QIPVAVYGP-EAGILATDCPICLGEFADGEKVRVLPKCNHGFHVRCIDTWLSSHSSCPTC 359
           QIP+ VYG   A I ATDCPICLGEF DGEKVRVLPKCNH FHVRCIDTWL SHSSCP C
Sbjct: 94  QIPIVVYGSGSASIAATDCPICLGEFVDGEKVRVLPKCNHRFHVRCIDTWLLSHSSCPNC 153

Query: 360 RHSLLDRTAVEG 395
           R SLL+ T + G
Sbjct: 154 RQSLLEHTTISG 165


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