BLASTX nr result

ID: Dioscorea21_contig00027365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027365
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38416.3| unnamed protein product [Vitis vinifera]              105   5e-21
emb|CAN80033.1| hypothetical protein VITISV_007071 [Vitis vinifera]   104   8e-21
ref|XP_003562137.1| PREDICTED: poly(A) polymerase-like [Brachypo...   102   3e-20
tpg|DAA43184.1| TPA: hypothetical protein ZEAMMB73_451476, parti...    99   3e-19
tpg|DAA43183.1| TPA: hypothetical protein ZEAMMB73_451476 [Zea m...    99   3e-19

>emb|CBI38416.3| unnamed protein product [Vitis vinifera]
          Length = 262

 Score =  105 bits (261), Expect = 5e-21
 Identities = 48/68 (70%), Positives = 56/68 (82%)
 Frame = +3

Query: 102 WKTLDSSNAGIMNSDISSPTWTVLKILQRKGFDAYLVGGCVRDLLLKRKPKDFDIVTTAS 281
           WK LDS   GI  S ISSP+W VLK+LQR+GF+AYLVGGCVRDL+L + PKDFD++TTA 
Sbjct: 4   WKKLDSRTFGITRSMISSPSWVVLKLLQREGFEAYLVGGCVRDLILNKTPKDFDVITTAK 63

Query: 282 LKQIKKNF 305
           LKQIKK F
Sbjct: 64  LKQIKKRF 71


>emb|CAN80033.1| hypothetical protein VITISV_007071 [Vitis vinifera]
          Length = 693

 Score =  104 bits (259), Expect = 8e-21
 Identities = 48/68 (70%), Positives = 56/68 (82%)
 Frame = +3

Query: 102 WKTLDSSNAGIMNSDISSPTWTVLKILQRKGFDAYLVGGCVRDLLLKRKPKDFDIVTTAS 281
           WK LDS   GI  S ISSP+W VLK+LQR+GF+AYLVGGCVRDL+L + PKDFD++TTA 
Sbjct: 4   WKKLDSRTFGITRSMISSPSWFVLKLLQREGFEAYLVGGCVRDLILNKTPKDFDVITTAK 63

Query: 282 LKQIKKNF 305
           LKQIKK F
Sbjct: 64  LKQIKKRF 71


>ref|XP_003562137.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
          Length = 553

 Score =  102 bits (254), Expect = 3e-20
 Identities = 50/85 (58%), Positives = 62/85 (72%)
 Frame = +3

Query: 45  LRDITWRSIARESSYDPATWKTLDSSNAGIMNSDISSPTWTVLKILQRKGFDAYLVGGCV 224
           LR+   RS +R    D ++W+  D+   GI    I    WTVL++L+RKGF+AYLVGGCV
Sbjct: 45  LRNGRSRSASRPGFIDTSSWRFFDARAVGIPTGSIPRNCWTVLQMLKRKGFEAYLVGGCV 104

Query: 225 RDLLLKRKPKDFDIVTTASLKQIKK 299
           RDLLLKR PKDFD++TTASLKQIKK
Sbjct: 105 RDLLLKRAPKDFDVITTASLKQIKK 129


>tpg|DAA43184.1| TPA: hypothetical protein ZEAMMB73_451476, partial [Zea mays]
          Length = 248

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 47/76 (61%), Positives = 56/76 (73%)
 Frame = +3

Query: 75  RESSYDPATWKTLDSSNAGIMNSDISSPTWTVLKILQRKGFDAYLVGGCVRDLLLKRKPK 254
           R    DP++WK  DS   GI    I +  W VLK L+R+GF AYLVGGCVRDLLLKR PK
Sbjct: 64  RPGFVDPSSWKHFDSRAVGIKPGAIHTDAWAVLKKLRREGFQAYLVGGCVRDLLLKRVPK 123

Query: 255 DFDIVTTASLKQIKKN 302
           DFD++TTASL+Q+KKN
Sbjct: 124 DFDVITTASLEQLKKN 139


>tpg|DAA43183.1| TPA: hypothetical protein ZEAMMB73_451476 [Zea mays]
          Length = 477

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 47/76 (61%), Positives = 56/76 (73%)
 Frame = +3

Query: 75  RESSYDPATWKTLDSSNAGIMNSDISSPTWTVLKILQRKGFDAYLVGGCVRDLLLKRKPK 254
           R    DP++WK  DS   GI    I +  W VLK L+R+GF AYLVGGCVRDLLLKR PK
Sbjct: 64  RPGFVDPSSWKHFDSRAVGIKPGAIHTDAWAVLKKLRREGFQAYLVGGCVRDLLLKRVPK 123

Query: 255 DFDIVTTASLKQIKKN 302
           DFD++TTASL+Q+KKN
Sbjct: 124 DFDVITTASLEQLKKN 139


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