BLASTX nr result

ID: Dioscorea21_contig00027360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027360
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADG57943.1| transcription factor [Lycoris longituba]                73   3e-11
gb|AAX96729.1| B3 DNA binding domain, putative [Oryza sativa Jap...    63   2e-08
gb|EEE51804.1| hypothetical protein OsJ_33271 [Oryza sativa Japo...    63   2e-08
ref|NP_001067431.1| Os11g0197600 [Oryza sativa Japonica Group] g...    63   2e-08
gb|EEC67837.1| hypothetical protein OsI_35443 [Oryza sativa Indi...    63   3e-08

>gb|ADG57943.1| transcription factor [Lycoris longituba]
          Length = 178

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 40/93 (43%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
 Frame = +3

Query: 3   FVSIMHLTHVSNRCFLTIPSGFVR-RLPNTTQIILLQTPGGERSWAVNYLVQKNITGFTG 179
           F+  +   +VSN CF+ IPSGF +  LP+    ++LQ PG  + W VN  V   +  F  
Sbjct: 87  FILFLVPGNVSNLCFVCIPSGFWKAHLPSKNCTVVLQVPGLRKKWCVNLYVGDMMKRF-- 144

Query: 180 QWKRFVIDNKLKEGDICLFELIGKKKEIRMNVY 278
           +W  FVIDN LK GD CLFEL+    +I M V+
Sbjct: 145 RWTSFVIDNGLKVGDACLFELVNCSMDILMTVH 177


>gb|AAX96729.1| B3 DNA binding domain, putative [Oryza sativa Japonica Group]
          Length = 363

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
 Frame = +3

Query: 6   VSIMHLTHVSNRCFLTIPSGFVRR-LPNTTQIILLQTPGGERSWAVNYLV--QKNITGFT 176
           V IM  ++V    F+ IP  FVR  LP+T + I L  P G ++W VNY+    +++  F+
Sbjct: 256 VQIMMESYVYVGFFMNIPCEFVRECLPHTNKRITLWDPQG-KAWEVNYVYYSDRSVGSFS 314

Query: 177 GQWKRFVIDNKLKEGDICLFELIGKKKEIRMNVYFWQPS*MQCKLLLD 320
           G W +F + N L++ D+C+FEL+ +K  I++++Y   P     KL  D
Sbjct: 315 GGWGKFAVGNNLEKFDVCVFELV-QKDNIKVHIYRVVPEITPHKLRSD 361


>gb|EEE51804.1| hypothetical protein OsJ_33271 [Oryza sativa Japonica Group]
          Length = 422

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
 Frame = +3

Query: 6   VSIMHLTHVSNRCFLTIPSGFVRR-LPNTTQIILLQTPGGERSWAVNYLV--QKNITGFT 176
           V IM  ++V    F+ IP  FVR  LP+T + I L  P G ++W VNY+    +++  F+
Sbjct: 315 VQIMMESYVYVGFFMNIPCEFVRECLPHTNKRITLWDPQG-KAWEVNYVYYSDRSVGSFS 373

Query: 177 GQWKRFVIDNKLKEGDICLFELIGKKKEIRMNVYFWQPS*MQCKLLLD 320
           G W +F + N L++ D+C+FEL+ +K  I++++Y   P     KL  D
Sbjct: 374 GGWGKFAVGNNLEKFDVCVFELV-QKDNIKVHIYRVVPEITPHKLRSD 420


>ref|NP_001067431.1| Os11g0197600 [Oryza sativa Japonica Group]
           gi|122208042|sp|Q2R9D2.1|Y1176_ORYSJ RecName: Full=B3
           domain-containing protein Os11g0197600
           gi|108864092|gb|ABA91888.2| B3 DNA binding domain
           containing protein, expressed [Oryza sativa Japonica
           Group] gi|113644653|dbj|BAF27794.1| Os11g0197600 [Oryza
           sativa Japonica Group] gi|215678868|dbj|BAG95305.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|215695287|dbj|BAG90478.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 406

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
 Frame = +3

Query: 6   VSIMHLTHVSNRCFLTIPSGFVRR-LPNTTQIILLQTPGGERSWAVNYLV--QKNITGFT 176
           V IM  ++V    F+ IP  FVR  LP+T + I L  P G ++W VNY+    +++  F+
Sbjct: 299 VQIMMESYVYVGFFMNIPCEFVRECLPHTNKRITLWDPQG-KAWEVNYVYYSDRSVGSFS 357

Query: 177 GQWKRFVIDNKLKEGDICLFELIGKKKEIRMNVYFWQPS*MQCKLLLD 320
           G W +F + N L++ D+C+FEL+ +K  I++++Y   P     KL  D
Sbjct: 358 GGWGKFAVGNNLEKFDVCVFELV-QKDNIKVHIYRVVPEITPHKLRSD 404


>gb|EEC67837.1| hypothetical protein OsI_35443 [Oryza sativa Indica Group]
          Length = 422

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
 Frame = +3

Query: 6   VSIMHLTHVSNRCFLTIPSGFVRR-LPNTTQIILLQTPGGERSWAVNYLV--QKNITGFT 176
           V IM  ++V    F+ IP  FVR  LP T + I L  P G ++W VNY+    +++  F+
Sbjct: 315 VQIMMESYVYVGFFMNIPCEFVRECLPRTNKRITLWDPQG-KAWEVNYVYYSDRSVGSFS 373

Query: 177 GQWKRFVIDNKLKEGDICLFELIGKKKEIRMNVYFWQPS*MQCKLLLD 320
           G W +F + N L++ D+C+FEL+ +K  I++++Y   P     KL  D
Sbjct: 374 GGWGKFAVGNNLEKFDVCVFELV-QKDNIKVHIYRVVPEITPHKLRSD 420


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