BLASTX nr result

ID: Dioscorea21_contig00027339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027339
         (875 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318083.1| predicted protein [Populus trichocarpa] gi|2...    94   3e-17
emb|CBI14995.3| unnamed protein product [Vitis vinifera]               89   1e-15
ref|XP_002511363.1| hypothetical protein RCOM_1509910 [Ricinus c...    88   3e-15
gb|EEE53443.1| hypothetical protein OsJ_36535 [Oryza sativa Japo...    88   3e-15
gb|ABA98985.2| expressed protein [Oryza sativa Japonica Group]         88   3e-15

>ref|XP_002318083.1| predicted protein [Populus trichocarpa] gi|222858756|gb|EEE96303.1|
            predicted protein [Populus trichocarpa]
          Length = 1519

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 77/218 (35%), Positives = 105/218 (48%), Gaps = 14/218 (6%)
 Frame = +3

Query: 57   GKTQSESLVEIKPDSAQRVIETLKNQCSRDEVGXXXXXXXXXXXXHYFRGSNHRKPQSSR 236
            GK+ SESL++  P S Q   ++     S D+               + R +N  K Q  R
Sbjct: 960  GKSASESLLD--PSSFQPQTDSRDGNQSMDQ------RTSSPNEEAHGRVNNQWKVQHFR 1011

Query: 237  SM-RKQRGIKTGDKFHGGKAVMWAPVRPQNKTIQSEGTTLNHNNQSGDNSLENGEHDTQN 413
             M R  +  K+ +KF  G AV+WAPVR Q+K I++       N      +    +   QN
Sbjct: 1012 RMPRNPQANKSTEKFPCGDAVIWAPVRSQSK-IEAADEATQKNVADAIRAPMKSDQQVQN 1070

Query: 414  VAKTKRAEMERYVPKPAVKERLYQNS--QQNLPCINQTPPCEVMVEPDFDGTSSVKQEFG 587
             A+TKRAE+ERY+PKP  KE   Q S  Q   P INQ  P E   +P+  G+ SV+    
Sbjct: 1071 NARTKRAEIERYIPKPVAKEMAQQGSSPQSVAPLINQITPNETAGKPE-SGSPSVESSQT 1129

Query: 588  S-----------DVTNGEGNKSTSRGKMHASWCQRHSA 668
            S           +  NG+G ++ S GKMH SW QR SA
Sbjct: 1130 SSTGMGKVGSTLEAKNGDGRQNKS-GKMHGSWRQRGSA 1166


>emb|CBI14995.3| unnamed protein product [Vitis vinifera]
          Length = 1437

 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 78/258 (30%), Positives = 117/258 (45%), Gaps = 12/258 (4%)
 Frame = +3

Query: 75   SLVEIKPDSAQRVIETLKNQCSRDEVGXXXXXXXXXXXXHYFRGSNHRKPQSSRSMRKQR 254
            S++E+ P S    IE++ N  S+D +              + R +N  KPQ  R M +  
Sbjct: 917  SVLELDPSS----IESISN--SKDAIQSFENRGSLPNEEAHGRPTNQWKPQHPRRMPRNP 970

Query: 255  GI-KTGDKFHGGKAVMWAPVRPQNKTIQSEGTTLNHNNQSGDNSLENGEHDTQNVAKTKR 431
             + ++ +KFH   +V+WAPV+ QNK+  ++  +        +N+   G+H  QN  K KR
Sbjct: 971  QVNRSVEKFHNSDSVVWAPVQSQNKSEVADEVS---QKTVVENTSSRGDHQVQNNLKNKR 1027

Query: 432  AEMERYVPKPAVKERLYQNSQQ--NLPCINQTPPCEVM--VEPDFDGTSSVK------QE 581
            AE++RYVPKP  KE   Q S Q    P INQT   E +   E     T S +      ++
Sbjct: 1028 AEIQRYVPKPVAKELAQQGSIQRPTSPSINQTTSDETIGRGESGSQSTDSAQLAGTAIEK 1087

Query: 582  FGSDVTNGEGNKSTSRGKMHASWCQRHSAGLPPVSQSFCNEGSSSSDVTGHLQP-QQHHQ 758
             G  V +  G+   +R     SW QR       V Q    E S +S V  ++Q   +H +
Sbjct: 1088 SGFAVESRNGDTKPNRQAKSGSWRQRVPIESTHV-QGLQEESSYNSSVEKNVQKFIEHSE 1146

Query: 759  SKGESGDSRAGSQLVYDD 812
            +    G S  G     DD
Sbjct: 1147 TLKPDGQSAKGQSKYSDD 1164


>ref|XP_002511363.1| hypothetical protein RCOM_1509910 [Ricinus communis]
            gi|223550478|gb|EEF51965.1| hypothetical protein
            RCOM_1509910 [Ricinus communis]
          Length = 1411

 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 59/150 (39%), Positives = 78/150 (52%), Gaps = 8/150 (5%)
 Frame = +3

Query: 234  RSMRKQRGIKTGDKFHGGKAVMWAPVRPQNKTIQSEGTTLNHNNQSGDNSLENGEHDTQN 413
            R MR Q+G K+ +K H G AV+WAPVR QNKT  S+    N   +S   S    +   QN
Sbjct: 920  RMMRNQQGNKSAEKNHNGDAVVWAPVRSQNKTEVSDEPNQNTIVESMVLS-SKSDQQAQN 978

Query: 414  VAKTKRAEMERYVPKPAVKERLYQNSQQNLPCINQTPPCEVMVEP--------DFDGTSS 569
              + KRAEMERY+PKPA KE    + Q  +   NQ    E++  P           GT+ 
Sbjct: 979  NPRNKRAEMERYIPKPAAKE---LSQQAVVSLTNQITSDEIVERPGSVDTESSQTCGTTM 1035

Query: 570  VKQEFGSDVTNGEGNKSTSRGKMHASWCQR 659
             K     +  NG+G ++ S GK+H SW QR
Sbjct: 1036 GKAGLTVESRNGDGRQNKS-GKVHGSWRQR 1064


>gb|EEE53443.1| hypothetical protein OsJ_36535 [Oryza sativa Japonica Group]
          Length = 1480

 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 4/200 (2%)
 Frame = +3

Query: 207  SNHRKPQSSRSMRKQRGIKTGDKFHGGKAVMWAPVRPQNKTIQSEGTTLNHNNQSGDNSL 386
            S+ ++ Q+ RS + Q+ I+  ++ HG +  +WAPV+P   + QS     +    +     
Sbjct: 1014 SHPKRQQAKRSGKNQQSIQPIERPHGNEGAVWAPVKPSGHSEQSGEAMWSTGVVAPTQPA 1073

Query: 387  ENGEHDTQNVAKTKRAEMERYVPKPAVKERLYQNSQQNLPCINQTPPCEVMVEPDFDGTS 566
                +D +NV KTKRAEMERYVPKP  KE   QN +Q LP        ++  +   + ++
Sbjct: 1074 GLNTNDGENVTKTKRAEMERYVPKPLSKELQQQNLRQILPSEKSCEENKIRDKEIVERST 1133

Query: 567  SVKQEFGSDVTNGEGNK-STSRGKMHASWCQRH---SAGLPPVSQSFCNEGSSSSDVTGH 734
              K E   +    EG K S   GK H SW +R+   S  + P +    +    S ++  H
Sbjct: 1134 GAKPETAPEAKKWEGKKTSKGHGKSHPSWRRRNTDESTLVGPKATELADNYQESHELQKH 1193

Query: 735  LQPQQHHQSKGESGDSRAGS 794
               Q     K     +R  S
Sbjct: 1194 TVHQPPEPDKQADAPARNSS 1213


>gb|ABA98985.2| expressed protein [Oryza sativa Japonica Group]
          Length = 1471

 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 4/200 (2%)
 Frame = +3

Query: 207  SNHRKPQSSRSMRKQRGIKTGDKFHGGKAVMWAPVRPQNKTIQSEGTTLNHNNQSGDNSL 386
            S+ ++ Q+ RS + Q+ I+  ++ HG +  +WAPV+P   + QS     +    +     
Sbjct: 1005 SHPKRQQAKRSGKNQQSIQPIERPHGNEGAVWAPVKPSGHSEQSGEAMWSTGVVAPTQPA 1064

Query: 387  ENGEHDTQNVAKTKRAEMERYVPKPAVKERLYQNSQQNLPCINQTPPCEVMVEPDFDGTS 566
                +D +NV KTKRAEMERYVPKP  KE   QN +Q LP        ++  +   + ++
Sbjct: 1065 GLNTNDGENVTKTKRAEMERYVPKPLSKELQQQNLRQILPSEKSCEENKIRDKEIVERST 1124

Query: 567  SVKQEFGSDVTNGEGNK-STSRGKMHASWCQRH---SAGLPPVSQSFCNEGSSSSDVTGH 734
              K E   +    EG K S   GK H SW +R+   S  + P +    +    S ++  H
Sbjct: 1125 GAKPETAPEAKKWEGKKTSKGHGKSHPSWRRRNTDESTLVGPKATELADNYQESHELQKH 1184

Query: 735  LQPQQHHQSKGESGDSRAGS 794
               Q     K     +R  S
Sbjct: 1185 TVHQPPEPDKQADAPARNSS 1204


Top