BLASTX nr result

ID: Dioscorea21_contig00027337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027337
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267055.1| PREDICTED: scarecrow-like protein 9 [Vitis v...    67   2e-09
ref|XP_002308163.1| GRAS family transcription factor [Populus tr...    62   5e-08
ref|XP_002314171.1| GRAS family transcription factor [Populus tr...    59   4e-07
ref|XP_002278317.2| PREDICTED: scarecrow-like protein 14-like [V...    59   5e-07
emb|CAN68327.1| hypothetical protein VITISV_042227 [Vitis vinifera]    59   5e-07

>ref|XP_002267055.1| PREDICTED: scarecrow-like protein 9 [Vitis vinifera]
          Length = 743

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/61 (50%), Positives = 45/61 (73%)
 Frame = +2

Query: 41  VAQVEVVDKRDYANTGSRSRKKANGEDLAVQEGRNNKQSAVYSEETLPSEMFDKVLLCNK 220
           V + E+ D+ +++ +GSR RK    ED+ ++E R+ KQ+AVY+E TL SEMFD VLLCN+
Sbjct: 260 VVKSELKDEEEHSPSGSRVRKNPQREDIGLEEERSTKQAAVYTESTLRSEMFDMVLLCNR 319

Query: 221 N 223
           N
Sbjct: 320 N 320


>ref|XP_002308163.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222854139|gb|EEE91686.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 749

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/75 (44%), Positives = 46/75 (61%)
 Frame = +2

Query: 2   FSQQEASKQRSSRVAQVEVVDKRDYANTGSRSRKKANGEDLAVQEGRNNKQSAVYSEETL 181
           F  QE   +      +VE  D  +++ +G R +K  + ED  V+EGR++KQ AVY+E TL
Sbjct: 252 FLSQEPKVRTGEVAIKVEKQDGGEHSPSGPRGKKNPHREDGDVEEGRSSKQLAVYTESTL 311

Query: 182 PSEMFDKVLLCNKNE 226
            S+MFDKVLLC   E
Sbjct: 312 RSDMFDKVLLCIPGE 326


>ref|XP_002314171.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222850579|gb|EEE88126.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 794

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/63 (52%), Positives = 40/63 (63%)
 Frame = +2

Query: 23  KQRSSRVAQVEVVDKRDYANTGSRSRKKANGEDLAVQEGRNNKQSAVYSEETLPSEMFDK 202
           K+++ RV   E   + D +  GSR RK    ED   +EGR+NKQSAVY EE   SEMFDK
Sbjct: 307 KEKTPRVVVKEEKSEADSSPNGSRGRKNHEREDSDPEEGRSNKQSAVYVEEGELSEMFDK 366

Query: 203 VLL 211
           VLL
Sbjct: 367 VLL 369


>ref|XP_002278317.2| PREDICTED: scarecrow-like protein 14-like [Vitis vinifera]
          Length = 746

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/62 (48%), Positives = 41/62 (66%)
 Frame = +2

Query: 41  VAQVEVVDKRDYANTGSRSRKKANGEDLAVQEGRNNKQSAVYSEETLPSEMFDKVLLCNK 220
           V ++E   + +Y    SR +K    EDL  +E RN+KQSAVY+E T+ SEMFD VLLCN+
Sbjct: 266 VVKMEKKHRNEYFTGVSRGKKNPYPEDLDSEEERNSKQSAVYNEMTVTSEMFDLVLLCNE 325

Query: 221 NE 226
            +
Sbjct: 326 GK 327


>emb|CAN68327.1| hypothetical protein VITISV_042227 [Vitis vinifera]
          Length = 746

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/62 (48%), Positives = 41/62 (66%)
 Frame = +2

Query: 41  VAQVEVVDKRDYANTGSRSRKKANGEDLAVQEGRNNKQSAVYSEETLPSEMFDKVLLCNK 220
           V ++E   + +Y    SR +K    EDL  +E RN+KQSAVY+E T+ SEMFD VLLCN+
Sbjct: 266 VVKMEKKHRNEYFTGVSRGKKNPYPEDLDSEEERNSKQSAVYNEMTVTSEMFDLVLLCNE 325

Query: 221 NE 226
            +
Sbjct: 326 GK 327


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