BLASTX nr result

ID: Dioscorea21_contig00027325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027325
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN78972.1| truncated copia-type polyprotein [Glycine max] gi...   150   1e-34
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   145   3e-33
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   145   3e-33
emb|CAA69271.1| lectin receptor kinase [Arabidopsis thaliana]         145   3e-33
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         145   3e-33

>gb|ACN78972.1| truncated copia-type polyprotein [Glycine max]
           gi|225016156|gb|ACN78979.1| truncated copia-type
           polyprotein [Glycine max]
          Length = 212

 Score =  150 bits (379), Expect = 1e-34
 Identities = 83/149 (55%), Positives = 99/149 (66%)
 Frame = +1

Query: 16  RRMKALLGSQDVWEIVEKGCDQPANEEGLTVSQXXXXXXXXXXXXXXXXXXXMCLDEGMF 195
           RRMKALLGSQD WEIVEKG                                   LDE MF
Sbjct: 24  RRMKALLGSQDAWEIVEKG-----------------------------------LDEAMF 48

Query: 196 EKVASATSAKDAWEILQNSFRGKDKVIKVRLQALRGEYESLKMKESETIEEYVNSVLAVV 375
           E V++AT++K+AWEIL+ S  G DKV KVRLQ LR E+ESL MKESE+I ++ N VLA+V
Sbjct: 49  ELVSNATTSKEAWEILKTSLEGVDKVKKVRLQTLRREFESLHMKESESISDFGNKVLAIV 108

Query: 376 NQLKRYGENVQDVQVVEKILRSLTAKYDY 462
           NQ+KRYGEN++DV+VVEKILRSL AK+DY
Sbjct: 109 NQMKRYGENMEDVRVVEKILRSLIAKFDY 137


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  145 bits (366), Expect = 3e-33
 Identities = 74/148 (50%), Positives = 98/148 (66%)
 Frame = +1

Query: 19  RMKALLGSQDVWEIVEKGCDQPANEEGLTVSQXXXXXXXXXXXXXXXXXXXMCLDEGMFE 198
           RMKA+LG+ DVWEIVEKG  +P NE  L+ +Q                     LDE  FE
Sbjct: 24  RMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFE 83

Query: 199 KVASATSAKDAWEILQNSFRGKDKVIKVRLQALRGEYESLKMKESETIEEYVNSVLAVVN 378
           KV  ATSAK+AWE L+ S++G D+V KVRLQ LRGE+E+L+MKE E + +Y + VL V N
Sbjct: 84  KVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTN 143

Query: 379 QLKRYGENVQDVQVVEKILRSLTAKYDY 462
            LKR GE + DV+++EK+LRSL  K+++
Sbjct: 144 NLKRNGEKLDDVRIMEKVLRSLDLKFEH 171


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
           gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
           polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  145 bits (366), Expect = 3e-33
 Identities = 74/148 (50%), Positives = 98/148 (66%)
 Frame = +1

Query: 19  RMKALLGSQDVWEIVEKGCDQPANEEGLTVSQXXXXXXXXXXXXXXXXXXXMCLDEGMFE 198
           RMKA+LG+ DVWEIVEKG  +P NE  L+ +Q                     LDE  FE
Sbjct: 24  RMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFE 83

Query: 199 KVASATSAKDAWEILQNSFRGKDKVIKVRLQALRGEYESLKMKESETIEEYVNSVLAVVN 378
           KV  ATSAK+AWE L+ S++G D+V KVRLQ LRGE+E+L+MKE E + +Y + VL V N
Sbjct: 84  KVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTN 143

Query: 379 QLKRYGENVQDVQVVEKILRSLTAKYDY 462
            LKR GE + DV+++EK+LRSL  K+++
Sbjct: 144 NLKRNGEKLDDVRIMEKVLRSLDLKFEH 171


>emb|CAA69271.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 544

 Score =  145 bits (366), Expect = 3e-33
 Identities = 74/148 (50%), Positives = 98/148 (66%)
 Frame = +1

Query: 19  RMKALLGSQDVWEIVEKGCDQPANEEGLTVSQXXXXXXXXXXXXXXXXXXXMCLDEGMFE 198
           RMKA+LG+ DVWEIVEKG  +P NE  L+ +Q                     LDE  FE
Sbjct: 40  RMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFE 99

Query: 199 KVASATSAKDAWEILQNSFRGKDKVIKVRLQALRGEYESLKMKESETIEEYVNSVLAVVN 378
           KV  ATSAK+AWE L+ S++G D+V KVRLQ LRGE+E+L+MKE E + +Y + VL V N
Sbjct: 100 KVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTN 159

Query: 379 QLKRYGENVQDVQVVEKILRSLTAKYDY 462
            LKR GE + DV+++EK+LRSL  K+++
Sbjct: 160 NLKRNGEKLDDVRIMEKVLRSLDLKFEH 187


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  145 bits (366), Expect = 3e-33
 Identities = 74/148 (50%), Positives = 98/148 (66%)
 Frame = +1

Query: 19  RMKALLGSQDVWEIVEKGCDQPANEEGLTVSQXXXXXXXXXXXXXXXXXXXMCLDEGMFE 198
           RMKA+LG+ DVWEIVEKG  +P NE  L+ +Q                     LDE  FE
Sbjct: 24  RMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFE 83

Query: 199 KVASATSAKDAWEILQNSFRGKDKVIKVRLQALRGEYESLKMKESETIEEYVNSVLAVVN 378
           KV  ATSAK+AWE L+ S++G D+V KVRLQ LRGE+E+L+MKE E + +Y + VL V N
Sbjct: 84  KVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTN 143

Query: 379 QLKRYGENVQDVQVVEKILRSLTAKYDY 462
            LKR GE + DV+++EK+LRSL  K+++
Sbjct: 144 NLKRNGEKLDDVRIMEKVLRSLDLKFEH 171


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