BLASTX nr result

ID: Dioscorea21_contig00027321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027321
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ10680.2| cold inducible histidine kinase 1 [Catharanthus r...    89   2e-25
ref|XP_002327653.1| histidine kinase osmosensor protein [Populus...    91   4e-25
ref|XP_003612202.1| Histidine kinase osmosensor protein [Medicag...    86   2e-24
ref|XP_002265248.1| PREDICTED: histidine kinase 1-like [Vitis vi...    90   3e-24
ref|XP_002529646.1| histidine kinase 1 plant, putative [Ricinus ...    83   3e-24

>gb|AAQ10680.2| cold inducible histidine kinase 1 [Catharanthus roseus]
          Length = 1205

 Score = 88.6 bits (218), Expect(2) = 2e-25
 Identities = 43/63 (68%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
 Frame = -3

Query: 338 QVKLSEYVISQHESPKGHGQ-AELYEAMRNITWALFASKKALDAITINYTNGFVQAFHRD 162
           QVKLSEYVI ++  P    Q  ELYE MR++TWALFAS++AL AITINY NGFVQAFHRD
Sbjct: 131 QVKLSEYVIRKYSKPVNQAQQVELYEVMRDVTWALFASRRALSAITINYRNGFVQAFHRD 190

Query: 161 RRA 153
            R+
Sbjct: 191 HRS 193



 Score = 52.0 bits (123), Expect(2) = 2e-25
 Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 5/57 (8%)
 Frame = -2

Query: 159 QGNNTYYIYSDLINAT-----NTQIQGSPGNHSEIPRAVSLNISAIWYREPLDPVTG 4
           + NNTYYIYSDL N +     +T +  S    ++  +++  N+SAIWYREPLDP TG
Sbjct: 192 RSNNTYYIYSDLANYSISGSYDTSLLASRQGWND--QSIQGNLSAIWYREPLDPATG 246


>ref|XP_002327653.1| histidine kinase osmosensor protein [Populus trichocarpa]
           gi|222836738|gb|EEE75131.1| histidine kinase osmosensor
           protein [Populus trichocarpa]
          Length = 1258

 Score = 90.9 bits (224), Expect(2) = 4e-25
 Identities = 45/63 (71%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
 Frame = -3

Query: 338 QVKLSEYVISQHESPKGHG-QAELYEAMRNITWALFASKKALDAITINYTNGFVQAFHRD 162
           QVKLSEYVI ++  P     Q ELYE MR+ITWALFAS+KAL+AITINY NGFVQAFHRD
Sbjct: 150 QVKLSEYVIRRYSKPTNQAEQVELYEVMRDITWALFASRKALNAITINYRNGFVQAFHRD 209

Query: 161 RRA 153
            R+
Sbjct: 210 HRS 212



 Score = 48.9 bits (115), Expect(2) = 4e-25
 Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 7/59 (11%)
 Frame = -2

Query: 159 QGNNTYYIYSDLINAT-------NTQIQGSPGNHSEIPRAVSLNISAIWYREPLDPVTG 4
           + NNT+YIYSDL+N +       +T +  S  + +   +++  N SAIWYREPLDP++G
Sbjct: 211 RSNNTFYIYSDLVNYSINAKGPYDTNMFSS--HQAWDDQSIHSNFSAIWYREPLDPISG 267


>ref|XP_003612202.1| Histidine kinase osmosensor protein [Medicago truncatula]
           gi|355513537|gb|AES95160.1| Histidine kinase osmosensor
           protein [Medicago truncatula]
          Length = 1218

 Score = 85.5 bits (210), Expect(2) = 2e-24
 Identities = 41/60 (68%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
 Frame = -3

Query: 338 QVKLSEYVISQHESPKGHG-QAELYEAMRNITWALFASKKALDAITINYTNGFVQAFHRD 162
           QVKLS+YVI ++ +P     Q ELYEAMR +TW+LFAS+KAL++ITINY NGFVQAFHRD
Sbjct: 145 QVKLSQYVIRRYSNPASQAEQVELYEAMRAVTWSLFASRKALNSITINYKNGFVQAFHRD 204



 Score = 52.0 bits (123), Expect(2) = 2e-24
 Identities = 29/55 (52%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
 Frame = -2

Query: 153 NNTYYIYSDLIN----ATNTQIQGSPGNHSEIP-RAVSLNISAIWYREPLDPVTG 4
           NNT+YIYSDL N    AT + +  S   H     + +  N SAIWYREPLDPVTG
Sbjct: 208 NNTFYIYSDLSNYSMVATTSNMLKSISTHQAWDDKTLHGNFSAIWYREPLDPVTG 262


>ref|XP_002265248.1| PREDICTED: histidine kinase 1-like [Vitis vinifera]
          Length = 1235

 Score = 90.1 bits (222), Expect(2) = 3e-24
 Identities = 44/63 (69%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
 Frame = -3

Query: 338 QVKLSEYVISQHESPKGHGQ-AELYEAMRNITWALFASKKALDAITINYTNGFVQAFHRD 162
           QVKLSEYVI ++  P    Q  ELYE MR++TWALFAS+KAL+AITINY NGFVQAFHRD
Sbjct: 121 QVKLSEYVIKRYSKPTTQAQQVELYEVMRDVTWALFASRKALNAITINYRNGFVQAFHRD 180

Query: 161 RRA 153
            R+
Sbjct: 181 HRS 183



 Score = 46.6 bits (109), Expect(2) = 3e-24
 Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 6/58 (10%)
 Frame = -2

Query: 159 QGNNTYYIYSDLINATNTQIQGSPGNHSEIP------RAVSLNISAIWYREPLDPVTG 4
           + NNT+YI+SDL+N +   I GS  +++         +++  NISAIWY  PLDPV+G
Sbjct: 182 RSNNTFYIFSDLVNYS---ISGSYNSNTLSSHQGWNDQSIHSNISAIWYHVPLDPVSG 236


>ref|XP_002529646.1| histidine kinase 1 plant, putative [Ricinus communis]
           gi|223530872|gb|EEF32733.1| histidine kinase 1 plant,
           putative [Ricinus communis]
          Length = 1206

 Score = 83.2 bits (204), Expect(2) = 3e-24
 Identities = 40/63 (63%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
 Frame = -3

Query: 338 QVKLSEYVISQHESPKGHG-QAELYEAMRNITWALFASKKALDAITINYTNGFVQAFHRD 162
           QVKLSEYVI ++ +      Q ELYE M+++TWA+FAS+KAL+AITI Y NGFVQAFHRD
Sbjct: 144 QVKLSEYVIKRYSNSATQAEQVELYEVMKDVTWAMFASRKALNAITITYRNGFVQAFHRD 203

Query: 161 RRA 153
            R+
Sbjct: 204 HRS 206



 Score = 53.5 bits (127), Expect(2) = 3e-24
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 5/58 (8%)
 Frame = -2

Query: 159 QGNNTYYIYSDLINATNTQIQGSPGNHSEI-----PRAVSLNISAIWYREPLDPVTGN 1
           + NNT+YIYS+L+N + +  + S  N          +++  N+SAIWYREPLDP TGN
Sbjct: 205 RSNNTFYIYSNLVNYSISAAEPSDANMLSSRQGWNDQSIHGNLSAIWYREPLDPTTGN 262


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