BLASTX nr result

ID: Dioscorea21_contig00027315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027315
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACG24523.1| mTERF family protein [Zea mays] gi|414873674|tpg|...    61   2e-07
ref|NP_001136974.1| uncharacterized protein LOC100217134 [Zea ma...    61   2e-07
ref|XP_002446953.1| hypothetical protein SORBIDRAFT_06g025765 [S...    57   4e-06
ref|NP_001067460.1| Os11g0206600 [Oryza sativa Japonica Group] g...    56   6e-06
ref|XP_002466189.1| hypothetical protein SORBIDRAFT_01g003170 [S...    56   6e-06

>gb|ACG24523.1| mTERF family protein [Zea mays] gi|414873674|tpg|DAA52231.1| TPA:
           putative mitochondrial transcription termination factor
           family protein [Zea mays]
          Length = 400

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 31/62 (50%), Positives = 40/62 (64%)
 Frame = -1

Query: 625 SLEKRLIPRYHVMQVLKPKRLNNGNYSLLSTMSYSEKMFVKNFLLCHKKDAPELYDWYIS 446
           SLEKRL+PRY V++VL+ K L N N SL S  S +E+ F   F+ CHK   P L D Y +
Sbjct: 331 SLEKRLVPRYRVIKVLQGKGLLNSNMSLSSLASLAEETFKSKFVDCHKDCVPGLADAYAA 390

Query: 445 SC 440
           +C
Sbjct: 391 AC 392


>ref|NP_001136974.1| uncharacterized protein LOC100217134 [Zea mays]
           gi|194697822|gb|ACF82995.1| unknown [Zea mays]
          Length = 400

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 31/62 (50%), Positives = 40/62 (64%)
 Frame = -1

Query: 625 SLEKRLIPRYHVMQVLKPKRLNNGNYSLLSTMSYSEKMFVKNFLLCHKKDAPELYDWYIS 446
           SLEKRL+PRY V++VL+ K L N N SL S  S +E+ F   F+ CHK   P L D Y +
Sbjct: 331 SLEKRLVPRYRVIKVLQGKGLLNSNMSLSSLASLAEETFKSKFVDCHKDCVPGLADAYAA 390

Query: 445 SC 440
           +C
Sbjct: 391 AC 392


>ref|XP_002446953.1| hypothetical protein SORBIDRAFT_06g025765 [Sorghum bicolor]
           gi|241938136|gb|EES11281.1| hypothetical protein
           SORBIDRAFT_06g025765 [Sorghum bicolor]
          Length = 253

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 29/64 (45%), Positives = 39/64 (60%)
 Frame = -1

Query: 625 SLEKRLIPRYHVMQVLKPKRLNNGNYSLLSTMSYSEKMFVKNFLLCHKKDAPELYDWYIS 446
           SLEKRL+PR++VM++L+ K L N N S L+     EK F   F+ CHK   P L D Y +
Sbjct: 184 SLEKRLMPRHYVMKILQEKGLLNSNTSFLTFAKLGEKSFKLKFIDCHKDSIPGLADAYAT 243

Query: 445 SCKG 434
           +  G
Sbjct: 244 ARTG 247


>ref|NP_001067460.1| Os11g0206600 [Oryza sativa Japonica Group]
           gi|62732917|gb|AAX95036.1| mTERF, putative [Oryza sativa
           Japonica Group] gi|77549197|gb|ABA91994.1| mTERF family
           protein, expressed [Oryza sativa Japonica Group]
           gi|108864116|gb|ABG22408.1| mTERF family protein,
           expressed [Oryza sativa Japonica Group]
           gi|113644682|dbj|BAF27823.1| Os11g0206600 [Oryza sativa
           Japonica Group] gi|125533746|gb|EAY80294.1| hypothetical
           protein OsI_35464 [Oryza sativa Indica Group]
           gi|215766638|dbj|BAG98866.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 392

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/69 (39%), Positives = 42/69 (60%)
 Frame = -1

Query: 625 SLEKRLIPRYHVMQVLKPKRLNNGNYSLLSTMSYSEKMFVKNFLLCHKKDAPELYDWYIS 446
           SLEKR++PR+ VM++L+   L        S++ YSEK FV  ++  +K+ AP L D Y +
Sbjct: 321 SLEKRMVPRHSVMKILRTMGLMKDAVDFSSSLVYSEKKFVARYIDPYKQAAPTLADSYAA 380

Query: 445 SCKGSKHSH 419
           +C G   +H
Sbjct: 381 ACAGKMPAH 389


>ref|XP_002466189.1| hypothetical protein SORBIDRAFT_01g003170 [Sorghum bicolor]
           gi|241920043|gb|EER93187.1| hypothetical protein
           SORBIDRAFT_01g003170 [Sorghum bicolor]
          Length = 397

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/64 (45%), Positives = 39/64 (60%)
 Frame = -1

Query: 625 SLEKRLIPRYHVMQVLKPKRLNNGNYSLLSTMSYSEKMFVKNFLLCHKKDAPELYDWYIS 446
           SLEKRL+PR+HVM+ L+ K L N N +LL  +   E+ F  NF+  HK   P L D Y +
Sbjct: 328 SLEKRLVPRHHVMKALQEKGLLNSNTNLLQLVLCREEAFKSNFIDRHKNSVPGLADAYAA 387

Query: 445 SCKG 434
           +  G
Sbjct: 388 ARAG 391


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