BLASTX nr result

ID: Dioscorea21_contig00027276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027276
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003576752.1| PREDICTED: transcription factor PCF2-like [B...   116   2e-24
tpg|DAA48356.1| TPA: hypothetical protein ZEAMMB73_169846 [Zea m...   115   4e-24
ref|NP_001062409.1| Os08g0544800 [Oryza sativa Japonica Group] g...   112   4e-23
dbj|BAA23143.1| PCF2 [Oryza sativa Japonica Group]                    112   4e-23
emb|CBI38834.3| unnamed protein product [Vitis vinifera]              106   2e-21

>ref|XP_003576752.1| PREDICTED: transcription factor PCF2-like [Brachypodium distachyon]
          Length = 367

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/83 (67%), Positives = 64/83 (77%)
 Frame = -2

Query: 253 ASRRTVAAAEQGLIAPKAEPMEMMTGLPVIRRPAGARTKDRHTKVEGRGRRIRMPAACAA 74
           A    +    QG + PK EP+E   G+ ++R+P   R +DRHTKVEGRGRRIRMPAACAA
Sbjct: 37  AGAMAMVPMHQGFMVPKPEPVEFFGGMAMVRKPP-PRNRDRHTKVEGRGRRIRMPAACAA 95

Query: 73  RIFQLTRELGHKSDGETIRWLLQ 5
           RIFQLTRELGHKSDGETIRWLLQ
Sbjct: 96  RIFQLTRELGHKSDGETIRWLLQ 118


>tpg|DAA48356.1| TPA: hypothetical protein ZEAMMB73_169846 [Zea mays]
          Length = 323

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/77 (71%), Positives = 61/77 (79%)
 Frame = -2

Query: 235 AAAEQGLIAPKAEPMEMMTGLPVIRRPAGARTKDRHTKVEGRGRRIRMPAACAARIFQLT 56
           A +  G + PK EP+E   G+ V+R     R +DRHTKVEGRGRRIRMPAACAARIFQLT
Sbjct: 33  AISMHGFMVPKPEPVEFFGGMAVVRSKPPPRNRDRHTKVEGRGRRIRMPAACAARIFQLT 92

Query: 55  RELGHKSDGETIRWLLQ 5
           RELGHKSDGETIRWLLQ
Sbjct: 93  RELGHKSDGETIRWLLQ 109


>ref|NP_001062409.1| Os08g0544800 [Oryza sativa Japonica Group]
           gi|75135013|sp|Q6ZBH6.1|PCF2_ORYSJ RecName:
           Full=Transcription factor PCF2
           gi|187470917|sp|A2YXQ1.1|PCF2_ORYSI RecName:
           Full=Transcription factor PCF2
           gi|42408554|dbj|BAD09732.1| putative transcription
           factor PCF3 [Oryza sativa Japonica Group]
           gi|113624378|dbj|BAF24323.1| Os08g0544800 [Oryza sativa
           Japonica Group] gi|125562414|gb|EAZ07862.1| hypothetical
           protein OsI_30124 [Oryza sativa Indica Group]
           gi|125604212|gb|EAZ43537.1| hypothetical protein
           OsJ_28158 [Oryza sativa Japonica Group]
           gi|215765787|dbj|BAG87484.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215767506|dbj|BAG99734.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 373

 Score =  112 bits (279), Expect = 4e-23
 Identities = 53/70 (75%), Positives = 60/70 (85%)
 Frame = -2

Query: 214 IAPKAEPMEMMTGLPVIRRPAGARTKDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKS 35
           + PK EP+E   G+ ++R+P   R +DRHTKVEGRGRRIRMPAACAARIFQLTRELGHKS
Sbjct: 52  LVPKPEPVEFFGGMAMVRKPP-PRNRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKS 110

Query: 34  DGETIRWLLQ 5
           DGETIRWLLQ
Sbjct: 111 DGETIRWLLQ 120


>dbj|BAA23143.1| PCF2 [Oryza sativa Japonica Group]
          Length = 373

 Score =  112 bits (279), Expect = 4e-23
 Identities = 53/70 (75%), Positives = 60/70 (85%)
 Frame = -2

Query: 214 IAPKAEPMEMMTGLPVIRRPAGARTKDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKS 35
           + PK EP+E   G+ ++R+P   R +DRHTKVEGRGRRIRMPAACAARIFQLTRELGHKS
Sbjct: 52  LVPKPEPVEFFGGMAMVRKPP-PRNRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKS 110

Query: 34  DGETIRWLLQ 5
           DGETIRWLLQ
Sbjct: 111 DGETIRWLLQ 120


>emb|CBI38834.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score =  106 bits (265), Expect = 2e-21
 Identities = 58/88 (65%), Positives = 63/88 (71%), Gaps = 4/88 (4%)
 Frame = -2

Query: 253 ASRRTVAAAEQGLIAPKAEPMEMMTGLPVIRRPAG----ARTKDRHTKVEGRGRRIRMPA 86
           A  R+ AA     + P A PM +      +RRPA     A TKDRHTKVEGRGRRIRMPA
Sbjct: 83  AEERSPAAPPAMGVVPVAMPMPVQ-----VRRPAPPVKRASTKDRHTKVEGRGRRIRMPA 137

Query: 85  ACAARIFQLTRELGHKSDGETIRWLLQH 2
            CAARIFQLTRELGHKSDGETIRWLL+H
Sbjct: 138 TCAARIFQLTRELGHKSDGETIRWLLEH 165


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