BLASTX nr result

ID: Dioscorea21_contig00027209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027209
         (808 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containi...   117   2e-24
gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japo...   116   7e-24
ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group] g...   116   7e-24
gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indi...   115   9e-24
ref|XP_002520167.1| pentatricopeptide repeat-containing protein,...   115   1e-23

>ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  117 bits (294), Expect = 2e-24
 Identities = 54/90 (60%), Positives = 70/90 (77%)
 Frame = -2

Query: 807 ILITGHCKSRNMKEACYYYSEMVSKGFNLRKSSYNALIKLLFRKKKLQEATRLFEEMRAM 628
           ILI GHCK+RNMKEA + + EMV KGF+L  +SYN+LIK  +++KK +EA +LFEEMR  
Sbjct: 642 ILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTH 701

Query: 627 KFVADKEVYSIFIDVNYNEKNVQAVLELCD 538
            F+A+KE+Y IF+DVNY E N +  LELCD
Sbjct: 702 GFIAEKEIYDIFVDVNYEEGNWENTLELCD 731


>gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  116 bits (290), Expect = 7e-24
 Identities = 53/90 (58%), Positives = 71/90 (78%)
 Frame = -2

Query: 807 ILITGHCKSRNMKEACYYYSEMVSKGFNLRKSSYNALIKLLFRKKKLQEATRLFEEMRAM 628
           ILI GHCK+RNMKEA Y++SEM+ KGF L  SSYNALI+LL +KKK  EA RLFE+MR  
Sbjct: 640 ILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKE 699

Query: 627 KFVADKEVYSIFIDVNYNEKNVQAVLELCD 538
           +  A+ +VY+ +ID+++NE N+++ L LCD
Sbjct: 700 RLTAEPDVYNFYIDLSFNEDNLESTLALCD 729


>ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
           gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza
           sativa Japonica Group] gi|50509504|dbj|BAD31185.1|
           putative CRP1 protein [Oryza sativa Japonica Group]
           gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa
           Japonica Group] gi|215715304|dbj|BAG95055.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  116 bits (290), Expect = 7e-24
 Identities = 53/90 (58%), Positives = 71/90 (78%)
 Frame = -2

Query: 807 ILITGHCKSRNMKEACYYYSEMVSKGFNLRKSSYNALIKLLFRKKKLQEATRLFEEMRAM 628
           ILI GHCK+RNMKEA Y++SEM+ KGF L  SSYNALI+LL +KKK  EA RLFE+MR  
Sbjct: 640 ILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKE 699

Query: 627 KFVADKEVYSIFIDVNYNEKNVQAVLELCD 538
           +  A+ +VY+ +ID+++NE N+++ L LCD
Sbjct: 700 RLTAEPDVYNFYIDLSFNEDNLESTLALCD 729


>gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  115 bits (289), Expect = 9e-24
 Identities = 53/90 (58%), Positives = 71/90 (78%)
 Frame = -2

Query: 807 ILITGHCKSRNMKEACYYYSEMVSKGFNLRKSSYNALIKLLFRKKKLQEATRLFEEMRAM 628
           ILI GHCK+RNMKEA Y++SEM+ KGF L  SSYNALI+LL +KKK  EA RLFE+MR  
Sbjct: 640 ILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKD 699

Query: 627 KFVADKEVYSIFIDVNYNEKNVQAVLELCD 538
           +  A+ +VY+ +ID+++NE N+++ L LCD
Sbjct: 700 RLTAEPDVYNFYIDLSFNEDNLESTLALCD 729


>ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540659|gb|EEF42222.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 604

 Score =  115 bits (287), Expect = 1e-23
 Identities = 55/90 (61%), Positives = 68/90 (75%)
 Frame = -2

Query: 807 ILITGHCKSRNMKEACYYYSEMVSKGFNLRKSSYNALIKLLFRKKKLQEATRLFEEMRAM 628
           ILI GHCK+RNMKEA + + EMV K FNL  SSYNALIK  F++KKL EA +LFEEMR  
Sbjct: 500 ILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRRE 559

Query: 627 KFVADKEVYSIFIDVNYNEKNVQAVLELCD 538
             VA  E+Y++F+D+NY E N++  LELCD
Sbjct: 560 GLVASAEIYNLFVDMNYEEGNMETTLELCD 589


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