BLASTX nr result

ID: Dioscorea21_contig00027204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027204
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]          75   4e-13
emb|CAN64589.1| hypothetical protein VITISV_008453 [Vitis vinifera]    77   1e-12
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]    73   5e-12
emb|CAN70827.1| hypothetical protein VITISV_029099 [Vitis vinifera]    75   7e-12
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]            75   7e-12

>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score = 75.1 bits (183), Expect(2) = 4e-13
 Identities = 33/62 (53%), Positives = 45/62 (72%)
 Frame = -1

Query: 188 LFTDAGKPESFQETQSCLKKARWQKAMEKEMNSLHRNQTRDLVKLPSGKNALKNRWVYVI 9
           L TD G+PES++E     +K +W +AM++EMNSL+ N T +LVK P  + ALKNRWVY +
Sbjct: 802 LLTDGGEPESYEEAMESDQKRQWFEAMQEEMNSLYVNDTFELVKAPKNRKALKNRWVYRV 861

Query: 8   KH 3
           KH
Sbjct: 862 KH 863



 Score = 23.9 bits (50), Expect(2) = 4e-13
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -2

Query: 247 RRSTRTHKPIQRYSPS 200
           RRS R  +P  RYSPS
Sbjct: 783 RRSDRERRPSTRYSPS 798


>emb|CAN64589.1| hypothetical protein VITISV_008453 [Vitis vinifera]
          Length = 903

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/72 (50%), Positives = 47/72 (65%)
 Frame = -1

Query: 221 HSKVFSILVLCLFTDAGKPESFQETQSCLKKARWQKAMEKEMNSLHRNQTRDLVKLPSGK 42
           HS  +S+    L TD G+PES++E      K +W  AM+ EM SLH N + +LV+LP GK
Sbjct: 539 HSTRYSVDDYVLLTDGGEPESYKEAMGDENKIKWVDAMQDEMKSLHENHSYELVELPKGK 598

Query: 41  NALKNRWVYVIK 6
            ALKNRWVY +K
Sbjct: 599 RALKNRWVYRVK 610


>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
          Length = 1362

 Score = 73.2 bits (178), Expect(2) = 5e-12
 Identities = 35/68 (51%), Positives = 43/68 (63%)
 Frame = -1

Query: 209 FSILVLCLFTDAGKPESFQETQSCLKKARWQKAMEKEMNSLHRNQTRDLVKLPSGKNALK 30
           +S+    L TD G+PES+ E      K +W  AM  EM SLH N + +LVKLP GK ALK
Sbjct: 793 YSVDDYVLLTDEGEPESYVEAMKDENKMKWVDAMRDEMESLHENHSFELVKLPKGKRALK 852

Query: 29  NRWVYVIK 6
           NRWVY +K
Sbjct: 853 NRWVYRVK 860



 Score = 22.3 bits (46), Expect(2) = 5e-12
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -2

Query: 250 LRRSTRTHKPIQRYS 206
           LRRSTR   P  RYS
Sbjct: 780 LRRSTRDRHPSTRYS 794


>emb|CAN70827.1| hypothetical protein VITISV_029099 [Vitis vinifera]
          Length = 649

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 34/68 (50%), Positives = 45/68 (66%)
 Frame = -1

Query: 209 FSILVLCLFTDAGKPESFQETQSCLKKARWQKAMEKEMNSLHRNQTRDLVKLPSGKNALK 30
           +S+    L TD G+PES++E      K +W  AM+ EM SLH N+  +L+KLP GK ALK
Sbjct: 582 YSVDDYVLLTDEGEPESYEEAMGDENKMKWVNAMQDEMKSLHENRFFELIKLPKGKKALK 641

Query: 29  NRWVYVIK 6
           NRWVY +K
Sbjct: 642 NRWVYRVK 649


>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 33/62 (53%), Positives = 45/62 (72%)
 Frame = -1

Query: 188 LFTDAGKPESFQETQSCLKKARWQKAMEKEMNSLHRNQTRDLVKLPSGKNALKNRWVYVI 9
           L TD G+P+SF+E      K +W +AM+ E+ SLH N+T +LVKLP GK ALKN+WV+ +
Sbjct: 805 LLTDGGEPDSFEEAIDDEHKEKWIEAMQDEIKSLHENKTFELVKLPKGKRALKNKWVFKM 864

Query: 8   KH 3
           KH
Sbjct: 865 KH 866


Top