BLASTX nr result

ID: Dioscorea21_contig00027181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027181
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273784.1| PREDICTED: squamosa promoter-binding-like pr...    77   1e-12
ref|XP_002510746.1| Squamosa promoter-binding protein, putative ...    68   7e-10
ref|XP_002307005.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
emb|CBI40788.3| unnamed protein product [Vitis vinifera]               60   2e-07
dbj|BAK05287.1| predicted protein [Hordeum vulgare subsp. vulgare]     57   1e-06

>ref|XP_002273784.1| PREDICTED: squamosa promoter-binding-like protein 14-like [Vitis
           vinifera]
          Length = 1070

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 44/109 (40%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
 Frame = -2

Query: 320 PSFYQNEQHRMASGTPNPNWNPMMWEWDSLSFTAKPSE---LSIGTNPLPKVVSNAEKKN 150
           PS     QH      P  NWNP +W+WDS+ F A P E   L +GT     V +  +KK 
Sbjct: 37  PSSNFQHQHPQRFQNPRDNWNPKVWDWDSVRFVANPLESELLRLGT--ATPVQTELKKKQ 94

Query: 149 KGEECSKVTTLSKSLEDGENLALKLASGAYLVEEQVLRPTKKVRSSSPG 3
           +G   +     +   ED E+L LKL  G   +EE V RP+K+VRS SPG
Sbjct: 95  EGTGITTALKKNPVDEDDESLRLKLGGGLSSIEEPVSRPSKRVRSGSPG 143


>ref|XP_002510746.1| Squamosa promoter-binding protein, putative [Ricinus communis]
           gi|223551447|gb|EEF52933.1| Squamosa promoter-binding
           protein, putative [Ricinus communis]
          Length = 1073

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 38/103 (36%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
 Frame = -2

Query: 305 NEQHRMASGTPNPNWNPMMWEWDSLSFTAKPSELSIGTNPLPKVVSNAEKKNKGEECSKV 126
           N QH      P  NWNP  W+WDS+ F AKP +       L    S+ +KK        +
Sbjct: 40  NFQHHRFPQNPRDNWNPKAWDWDSVRFVAKPLDADTNVLQLGTASSDHQKKTNASVNHNL 99

Query: 125 T--TLSKSLEDGENLALKLASGAYLVEEQVLRPTKKVRSSSPG 3
           T      + ++ + L L LA     VEE V RP K+VRS SPG
Sbjct: 100 TLKNAPPAGDEDDGLRLNLAGVFNAVEEPVSRPNKRVRSGSPG 142


>ref|XP_002307005.1| predicted protein [Populus trichocarpa] gi|222856454|gb|EEE94001.1|
           predicted protein [Populus trichocarpa]
          Length = 603

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/102 (34%), Positives = 52/102 (50%)
 Frame = -2

Query: 311 YQNEQHRMASGTPNPNWNPMMWEWDSLSFTAKPSELSIGTNPLPKVVSNAEKKNKGEECS 132
           +Q +QH     +   NWN   W+WDS+ F A+PS+ +  +      +  A ++ K ++ S
Sbjct: 41  FQLQQHHFLETSLEKNWNSKAWDWDSVGFVARPSDAAETSR-----LGTASRETKKKDES 95

Query: 131 KVTTLSKSLEDGENLALKLASGAYLVEEQVLRPTKKVRSSSP 6
              T S S  + + L L L      VEE V RP K+VRS SP
Sbjct: 96  DYKTKSNSANEDDGLGLNLGGSLTSVEEPVSRPNKRVRSGSP 137


>emb|CBI40788.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 37/106 (34%), Positives = 46/106 (43%)
 Frame = -2

Query: 320 PSFYQNEQHRMASGTPNPNWNPMMWEWDSLSFTAKPSELSIGTNPLPKVVSNAEKKNKGE 141
           PS     QH      P  NWNP +W+WDS+ F A P E                      
Sbjct: 37  PSSNFQHQHPQRFQNPRDNWNPKVWDWDSVRFVANPLE---------------------S 75

Query: 140 ECSKVTTLSKSLEDGENLALKLASGAYLVEEQVLRPTKKVRSSSPG 3
           E  ++ T + SL       LKL  G   +EE V RP+K+VRS SPG
Sbjct: 76  ELLRLGTATPSLR------LKLGGGLSSIEEPVSRPSKRVRSGSPG 115


>dbj|BAK05287.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 237

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 24/119 (20%)
 Frame = -2

Query: 287 ASGTPNPNWNPMMWEWDSLSFTAKPS----ELSIGTN----------PLPKVVSNAEKKN 150
           A      NWNP MW+WDS +FTA+PS     L  G N          P P   + AE + 
Sbjct: 49  AGAAAGGNWNPSMWDWDSRAFTARPSSDALRLGGGLNHHQHHHQQPPPPPPPATAAEAQR 108

Query: 149 KGEECSKVTTLSKSLEDGENLALKL----------ASGAYLVEEQVLRPTKKVRSSSPG 3
           +G   +   +L  +L +  ++A+ +          +  A   +EQ  RP+K+VRS SPG
Sbjct: 109 QGRGGAGDLSLQLNLREEASMAMDVSPTTTMSSSPSPPARTSQEQAARPSKRVRSGSPG 167


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