BLASTX nr result
ID: Dioscorea21_contig00027164
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00027164 (217 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272147.1| PREDICTED: upstream activation factor subuni... 65 6e-09 emb|CAN78429.1| hypothetical protein VITISV_011142 [Vitis vinifera] 65 6e-09 ref|XP_002463848.1| hypothetical protein SORBIDRAFT_01g007350 [S... 64 1e-08 ref|XP_002869158.1| hypothetical protein ARALYDRAFT_491238 [Arab... 64 2e-08 dbj|BAJ87657.1| predicted protein [Hordeum vulgare subsp. vulgare] 57 6e-08 >ref|XP_002272147.1| PREDICTED: upstream activation factor subunit spp27 [Vitis vinifera] Length = 145 Score = 65.1 bits (157), Expect = 6e-09 Identities = 33/47 (70%), Positives = 34/47 (72%) Frame = -1 Query: 142 AESKPSATPARKREPRGITKPCPISPELQALLGVEEIPRTQALKLIW 2 A SKP A KREPRGI KP ISPE+Q LGV EIPRTQALK IW Sbjct: 51 AASKPPAAATGKREPRGIMKPRRISPEMQDFLGVPEIPRTQALKQIW 97 >emb|CAN78429.1| hypothetical protein VITISV_011142 [Vitis vinifera] Length = 145 Score = 65.1 bits (157), Expect = 6e-09 Identities = 33/47 (70%), Positives = 34/47 (72%) Frame = -1 Query: 142 AESKPSATPARKREPRGITKPCPISPELQALLGVEEIPRTQALKLIW 2 A SKP A KREPRGI KP ISPE+Q LGV EIPRTQALK IW Sbjct: 51 AASKPPAAATGKREPRGIMKPRRISPEMQDFLGVPEIPRTQALKQIW 97 >ref|XP_002463848.1| hypothetical protein SORBIDRAFT_01g007350 [Sorghum bicolor] gi|241917702|gb|EER90846.1| hypothetical protein SORBIDRAFT_01g007350 [Sorghum bicolor] Length = 143 Score = 64.3 bits (155), Expect = 1e-08 Identities = 37/75 (49%), Positives = 46/75 (61%), Gaps = 5/75 (6%) Frame = -1 Query: 211 PVLPLAVSL--PRRILAPLPIRAVKAESKPSA---TPARKREPRGITKPCPISPELQALL 47 P LP A S PRR A L +RA A SK A T +K+ GIT+P P+SP LQA++ Sbjct: 21 PRLPAAASFAPPRRAAAALVVRAAAASSKSPAAAETAPKKKRATGITQPKPVSPALQAIV 80 Query: 46 GVEEIPRTQALKLIW 2 G IPRT+ALK +W Sbjct: 81 GEPVIPRTEALKRLW 95 >ref|XP_002869158.1| hypothetical protein ARALYDRAFT_491238 [Arabidopsis lyrata subsp. lyrata] gi|297314994|gb|EFH45417.1| hypothetical protein ARALYDRAFT_491238 [Arabidopsis lyrata subsp. lyrata] Length = 144 Score = 63.5 bits (153), Expect = 2e-08 Identities = 32/68 (47%), Positives = 41/68 (60%) Frame = -1 Query: 205 LPLAVSLPRRILAPLPIRAVKAESKPSATPARKREPRGITKPCPISPELQALLGVEEIPR 26 L L+ P + + + A S T + REPRGI KP P+SPE+Q ++GV EIPR Sbjct: 30 LRLSPHRPANLRMVRAVTSATAASSDPTTTTKTREPRGIMKPRPVSPEMQDVVGVPEIPR 89 Query: 25 TQALKLIW 2 TQALK IW Sbjct: 90 TQALKRIW 97 >dbj|BAJ87657.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 157 Score = 57.4 bits (137), Expect(2) = 6e-08 Identities = 26/56 (46%), Positives = 36/56 (64%) Frame = -1 Query: 169 APLPIRAVKAESKPSATPARKREPRGITKPCPISPELQALLGVEEIPRTQALKLIW 2 A + +RA + +A P +KR GIT P P+SP LQA +G E+PRT+A+K IW Sbjct: 52 AAVVVRAAAKSTAAAAAPNKKRAATGITIPRPVSPALQAFMGAAEVPRTEAMKRIW 107 Score = 24.3 bits (51), Expect(2) = 6e-08 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = -3 Query: 209 RPPARRLPSSEDPRPAPHP 153 +PP R P E P+ PHP Sbjct: 7 KPPRRSDPREETPKWRPHP 25