BLASTX nr result

ID: Dioscorea21_contig00027127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027127
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6EUK7.1|PUB04_ORYSJ RecName: Full=U-box domain-containing pr...   240   2e-61
dbj|BAG88374.1| unnamed protein product [Oryza sativa Japonica G...   240   2e-61
ref|NP_001046379.1| Os02g0234300 [Oryza sativa Japonica Group] g...   240   2e-61
ref|XP_002522266.1| ubiquitin-protein ligase, putative [Ricinus ...   237   1e-60
ref|XP_002451836.1| hypothetical protein SORBIDRAFT_04g008430 [S...   234   7e-60

>sp|Q6EUK7.1|PUB04_ORYSJ RecName: Full=U-box domain-containing protein 4; AltName:
           Full=Plant U-box protein 4; Short=OsPUB4
           gi|50251218|dbj|BAD27662.1| putative Avr9/Cf-9 rapidly
           elicited protein [Oryza sativa Japonica Group]
          Length = 728

 Score =  240 bits (612), Expect = 2e-61
 Identities = 127/212 (59%), Positives = 152/212 (71%), Gaps = 3/212 (1%)
 Frame = +2

Query: 2   PNRALRSLISRWCAANSIAYDSPETG---SEIXXXXXXXXXXXXXXXXXVDLLVRLLSSG 172
           PNRALRSLIS+WC    + YDSPE+    +E                    +LVR+L  G
Sbjct: 352 PNRALRSLISQWCGVYGLQYDSPESNEGMAECVAASCSSRAAMEANKATARILVRMLEDG 411

Query: 173 SDEAKTVAVRELRFLAKTGRDNRACIADAGAIPLLHLLLRSSNPIAQENTVTAILNLSIL 352
           S+  K VA +E+R LAKTG+ NRA IAD GAIPLL  LL S++ +AQEN VTA+LNLSI 
Sbjct: 412 SENVKAVAAKEIRLLAKTGKQNRAFIADLGAIPLLCRLLLSNDWMAQENAVTALLNLSIF 471

Query: 353 DKNKDLIMSEHGCLRSIVSVLRNGWTTEARENAAATLFSLSAIHDYKKMIMAEPGAVEAL 532
           + NK  IM + GCLR IV VL+NGWTTEA+ENAAATLFSLS +H++KK+IM EPGAVE L
Sbjct: 472 EPNKGRIMEQEGCLRLIVGVLQNGWTTEAKENAAATLFSLSVVHNFKKLIMNEPGAVEEL 531

Query: 533 AELLTIGSSRGKKDAVTALFNLSTHPESGEKM 628
           A +LT G+SRGKKDAV ALFNLSTHPES  +M
Sbjct: 532 ASMLTKGTSRGKKDAVMALFNLSTHPESSARM 563


>dbj|BAG88374.1| unnamed protein product [Oryza sativa Japonica Group]
           gi|222622488|gb|EEE56620.1| hypothetical protein
           OsJ_06003 [Oryza sativa Japonica Group]
          Length = 535

 Score =  240 bits (612), Expect = 2e-61
 Identities = 127/212 (59%), Positives = 152/212 (71%), Gaps = 3/212 (1%)
 Frame = +2

Query: 2   PNRALRSLISRWCAANSIAYDSPETG---SEIXXXXXXXXXXXXXXXXXVDLLVRLLSSG 172
           PNRALRSLIS+WC    + YDSPE+    +E                    +LVR+L  G
Sbjct: 159 PNRALRSLISQWCGVYGLQYDSPESNEGMAECVAASCSSRAAMEANKATARILVRMLEDG 218

Query: 173 SDEAKTVAVRELRFLAKTGRDNRACIADAGAIPLLHLLLRSSNPIAQENTVTAILNLSIL 352
           S+  K VA +E+R LAKTG+ NRA IAD GAIPLL  LL S++ +AQEN VTA+LNLSI 
Sbjct: 219 SENVKAVAAKEIRLLAKTGKQNRAFIADLGAIPLLCRLLLSNDWMAQENAVTALLNLSIF 278

Query: 353 DKNKDLIMSEHGCLRSIVSVLRNGWTTEARENAAATLFSLSAIHDYKKMIMAEPGAVEAL 532
           + NK  IM + GCLR IV VL+NGWTTEA+ENAAATLFSLS +H++KK+IM EPGAVE L
Sbjct: 279 EPNKGRIMEQEGCLRLIVGVLQNGWTTEAKENAAATLFSLSVVHNFKKLIMNEPGAVEEL 338

Query: 533 AELLTIGSSRGKKDAVTALFNLSTHPESGEKM 628
           A +LT G+SRGKKDAV ALFNLSTHPES  +M
Sbjct: 339 ASMLTKGTSRGKKDAVMALFNLSTHPESSARM 370


>ref|NP_001046379.1| Os02g0234300 [Oryza sativa Japonica Group]
           gi|113535910|dbj|BAF08293.1| Os02g0234300, partial
           [Oryza sativa Japonica Group]
          Length = 581

 Score =  240 bits (612), Expect = 2e-61
 Identities = 127/212 (59%), Positives = 152/212 (71%), Gaps = 3/212 (1%)
 Frame = +2

Query: 2   PNRALRSLISRWCAANSIAYDSPETG---SEIXXXXXXXXXXXXXXXXXVDLLVRLLSSG 172
           PNRALRSLIS+WC    + YDSPE+    +E                    +LVR+L  G
Sbjct: 205 PNRALRSLISQWCGVYGLQYDSPESNEGMAECVAASCSSRAAMEANKATARILVRMLEDG 264

Query: 173 SDEAKTVAVRELRFLAKTGRDNRACIADAGAIPLLHLLLRSSNPIAQENTVTAILNLSIL 352
           S+  K VA +E+R LAKTG+ NRA IAD GAIPLL  LL S++ +AQEN VTA+LNLSI 
Sbjct: 265 SENVKAVAAKEIRLLAKTGKQNRAFIADLGAIPLLCRLLLSNDWMAQENAVTALLNLSIF 324

Query: 353 DKNKDLIMSEHGCLRSIVSVLRNGWTTEARENAAATLFSLSAIHDYKKMIMAEPGAVEAL 532
           + NK  IM + GCLR IV VL+NGWTTEA+ENAAATLFSLS +H++KK+IM EPGAVE L
Sbjct: 325 EPNKGRIMEQEGCLRLIVGVLQNGWTTEAKENAAATLFSLSVVHNFKKLIMNEPGAVEEL 384

Query: 533 AELLTIGSSRGKKDAVTALFNLSTHPESGEKM 628
           A +LT G+SRGKKDAV ALFNLSTHPES  +M
Sbjct: 385 ASMLTKGTSRGKKDAVMALFNLSTHPESSARM 416


>ref|XP_002522266.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223538519|gb|EEF40124.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 719

 Score =  237 bits (604), Expect = 1e-60
 Identities = 130/212 (61%), Positives = 153/212 (72%), Gaps = 3/212 (1%)
 Frame = +2

Query: 2   PNRALRSLISRWCAANSIAYDSPE---TGSEIXXXXXXXXXXXXXXXXXVDLLVRLLSSG 172
           PNRALR+LI +WC A+ I Y+ PE   + +E                    LL++ L++G
Sbjct: 347 PNRALRNLIVQWCTAHGIPYEPPENTDSSAEGFAAASPTKAAIEANRATATLLIQQLANG 406

Query: 173 SDEAKTVAVRELRFLAKTGRDNRACIADAGAIPLLHLLLRSSNPIAQENTVTAILNLSIL 352
           S  AKT A RE+R LAKTG++NRA IA+AGAIP L  LL S NP+AQEN+VTA+LNLSI 
Sbjct: 407 SQNAKTTAAREIRLLAKTGKENRAFIAEAGAIPHLRNLLSSPNPVAQENSVTAMLNLSIY 466

Query: 353 DKNKDLIMSEHGCLRSIVSVLRNGWTTEARENAAATLFSLSAIHDYKKMIMAEPGAVEAL 532
           DKNK  IM E GCL SIV VLR G TTEARENAAATLFSLSA+HDYKK I  E GA+EAL
Sbjct: 467 DKNKSRIMDEEGCLGSIVEVLRFGLTTEARENAAATLFSLSAVHDYKKRIADEGGAIEAL 526

Query: 533 AELLTIGSSRGKKDAVTALFNLSTHPESGEKM 628
           A LL +G+SRGKKDAVTALFNLSTH E+  +M
Sbjct: 527 AGLLGVGTSRGKKDAVTALFNLSTHTENCARM 558


>ref|XP_002451836.1| hypothetical protein SORBIDRAFT_04g008430 [Sorghum bicolor]
           gi|241931667|gb|EES04812.1| hypothetical protein
           SORBIDRAFT_04g008430 [Sorghum bicolor]
          Length = 729

 Score =  234 bits (598), Expect = 7e-60
 Identities = 127/212 (59%), Positives = 148/212 (69%), Gaps = 3/212 (1%)
 Frame = +2

Query: 2   PNRALRSLISRWCAANSIAYDSPETGS---EIXXXXXXXXXXXXXXXXXVDLLVRLLSSG 172
           PN+ALRSLIS+WC  +   +DSPE+     E                    +LV+ L  G
Sbjct: 353 PNQALRSLISQWCGVHGFQFDSPESNEGMIECVAASCSSKAAIEANKATARILVKTLMEG 412

Query: 173 SDEAKTVAVRELRFLAKTGRDNRACIADAGAIPLLHLLLRSSNPIAQENTVTAILNLSIL 352
           SD AK VA RE+R LAKTG+ NRA IA+ GAIPLL  LL SS+ +AQEN VTA+LNLSI 
Sbjct: 413 SDNAKPVAAREIRLLAKTGKQNRAFIAELGAIPLLCRLLLSSDWMAQENAVTALLNLSIY 472

Query: 353 DKNKDLIMSEHGCLRSIVSVLRNGWTTEARENAAATLFSLSAIHDYKKMIMAEPGAVEAL 532
           + NK  IM +  CL  IVSVL+NGWTTEA+ENAAATLFSLS +HDYKK IM EPGAVE L
Sbjct: 473 EPNKTRIMEQDNCLHLIVSVLKNGWTTEAKENAAATLFSLSVVHDYKKKIMNEPGAVEEL 532

Query: 533 AELLTIGSSRGKKDAVTALFNLSTHPESGEKM 628
           A +LT G+ RGKKDAV ALFNLSTHPES  +M
Sbjct: 533 ASMLTKGTPRGKKDAVMALFNLSTHPESSGRM 564


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