BLASTX nr result

ID: Dioscorea21_contig00027125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027125
         (820 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313503.1| predicted protein [Populus trichocarpa] gi|2...   268   8e-70
ref|XP_002267438.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...   266   4e-69
ref|XP_002308325.1| predicted protein [Populus trichocarpa] gi|2...   265   7e-69
ref|XP_002336518.1| predicted protein [Populus trichocarpa] gi|2...   265   1e-68
ref|XP_002265439.2| PREDICTED: E3 ubiquitin-protein ligase PUB23...   264   2e-68

>ref|XP_002313503.1| predicted protein [Populus trichocarpa] gi|222849911|gb|EEE87458.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score =  268 bits (686), Expect = 8e-70
 Identities = 142/285 (49%), Positives = 194/285 (68%), Gaps = 13/285 (4%)
 Frame = -1

Query: 817 MEVVQVPPYFLWPFSLEIMSDPVTLSTGITYERKTIEKWMFTDKHNTCPVTKQPVFDYDF 638
           M+ + VP +FL P SL++M DPVT+STGITY+R+ IE+W+F+ K+NTCPVTKQ +F  D 
Sbjct: 1   MDQIDVPYHFLCPISLQLMRDPVTISTGITYDRENIERWLFSCKNNTCPVTKQELFGKDL 60

Query: 637 TPNHNLRRLIQAWCATNASFGVERFPTPRPPVTKTDILSLLNEAKK-PEYQINSLKKLRM 461
           TPNH LRRLIQAWC  NASFG+ER PTP+PP+ +  I  LLN+AKK P  Q+ SL++LR 
Sbjct: 61  TPNHTLRRLIQAWCTLNASFGIERIPTPKPPIERAQIAKLLNDAKKFPHLQLKSLRRLRS 120

Query: 460 IVLESDRNKHCVESTPGALDFLISIIKK------NINSFD-----TSACDEALMILSSIQ 314
           I LES+RN+ C+E   GA+DFL +I+K       +I S D     + A DEAL IL  ++
Sbjct: 121 ITLESERNRICLEEA-GAVDFLATILKNGDSTSVDIASDDNESEFSRASDEALNILYHLK 179

Query: 313 ISAQGLINLIKSH-DDLIHLFTSVMKKSNYQNRVHATLVLNSLIEATAPSKLIALKDELF 137
           IS + L NLI +  D  +     ++K S+YQ+R +AT++L S+ E   P  LI+++ E+F
Sbjct: 180 ISQRKLKNLITNDGDQFLESLLQILKHSSYQSRAYATMLLKSVFEVADPMHLISIRPEMF 239

Query: 136 IEVVKVLSDQISXXXXXXXXXXXXXLCPLGRNRVKAAEACAVSVL 2
           +E+V+VL+DQIS             +CP GRNR+KA E  AVSVL
Sbjct: 240 VELVRVLNDQISQQSSKAALKLLVEVCPWGRNRIKAVEGSAVSVL 284


>ref|XP_002267438.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Vitis vinifera]
          Length = 411

 Score =  266 bits (680), Expect = 4e-69
 Identities = 139/283 (49%), Positives = 187/283 (66%), Gaps = 11/283 (3%)
 Frame = -1

Query: 817 MEVVQVPPYFLWPFSLEIMSDPVTLSTGITYERKTIEKWMFTDKHNTCPVTKQPVF-DYD 641
           ME + VPP+FL P SLEIM DPVT+STGITY+R++IEKW+F+ K+NTCP TKQ +  D D
Sbjct: 1   MEEIDVPPFFLCPISLEIMKDPVTVSTGITYDRESIEKWLFSGKNNTCPATKQVLSADSD 60

Query: 640 FTPNHNLRRLIQAWCATNASFGVERFPTPRPPVTKTDILSLLNEAKKPEYQINSLKKLRM 461
            TPNH LRRLIQAWC  NAS GVER PTP+ P+ K  I+ LLN+AK P+ Q+  + KLR 
Sbjct: 61  LTPNHTLRRLIQAWCTLNASNGVERIPTPKIPINKIQIVKLLNDAKSPQLQMKCIGKLRA 120

Query: 460 IVLESDRNKHCVESTPGALDFLISIIKK-NINSFD---------TSACDEALMILSSIQI 311
           +  ESD NK C+ES  GA++FL SI+ K N  +F+          SA  EAL IL  + +
Sbjct: 121 LATESDANKRCIESA-GAVEFLASIVSKANFTTFEEESDKGLESRSASSEALSILHYLLL 179

Query: 310 SAQGLINLIKSHDDLIHLFTSVMKKSNYQNRVHATLVLNSLIEATAPSKLIALKDELFIE 131
           S  GL  L+  + + +     V+++ NY++R +A ++L+S+++   P +LIALK E F+E
Sbjct: 180 SEAGLKKLVGKNGEFVGCLVRVLQRGNYESRAYAVMLLSSMLQVADPIQLIALKPEFFVE 239

Query: 130 VVKVLSDQISXXXXXXXXXXXXXLCPLGRNRVKAAEACAVSVL 2
            V+VL D IS             +CP GRN+VKA EA AVS+L
Sbjct: 240 AVQVLQDHISHQATKATLKLLIEVCPWGRNKVKAVEAGAVSIL 282


>ref|XP_002308325.1| predicted protein [Populus trichocarpa] gi|222854301|gb|EEE91848.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score =  265 bits (678), Expect = 7e-69
 Identities = 139/284 (48%), Positives = 192/284 (67%), Gaps = 12/284 (4%)
 Frame = -1

Query: 817 MEVVQVPPYFLWPFSLEIMSDPVTLSTGITYERKTIEKWMFTDKHNTCPVTKQPVFDYDF 638
           ME ++VP +FL P SL+IM DPV + TGITY+R++IEKW+F+ K++TCP+TK  +   + 
Sbjct: 1   MEDIEVPSFFLCPISLQIMKDPVIVPTGITYDRESIEKWLFSGKNDTCPITKLVISGCEV 60

Query: 637 TPNHNLRRLIQAWCATNASFGVERFPTPRPPVTKTDILSLLNEAKKPEYQINSLKKLRMI 458
           TPNH LRRLIQ+WC  NAS+G+ER PTP+PP+ KT +  LLN+AK P+ Q+  L+KLR I
Sbjct: 61  TPNHTLRRLIQSWCTLNASYGIERIPTPKPPINKTQVAKLLNDAKSPQQQVKCLRKLRSI 120

Query: 457 VLESDRNKHCVESTPGALDFLISIIKK-NINSFDTSA---------CDEALMILSSIQIS 308
             E++ NK C+E+  GA++FL+S++   N  SF+ ++          DEAL IL  ++IS
Sbjct: 121 ANENETNKRCMEAA-GAVEFLVSVVNNFNSLSFEETSDDGFEIARPGDEALSILYGLEIS 179

Query: 307 AQGLINLIK--SHDDLIHLFTSVMKKSNYQNRVHATLVLNSLIEATAPSKLIALKDELFI 134
             GL NLI   + + +I   T VM+  NY++R +A L+L S++E   P KLI+LK ELF 
Sbjct: 180 ESGLKNLIMGINGELIIETLTKVMQGGNYESRAYAVLLLKSMLEVADPLKLISLKHELFS 239

Query: 133 EVVKVLSDQISXXXXXXXXXXXXXLCPLGRNRVKAAEACAVSVL 2
           E+V+VL DQIS             LCP GRNR+KA EA AVSVL
Sbjct: 240 EIVQVLRDQISHKASNASLQLLINLCPWGRNRIKAIEAKAVSVL 283


>ref|XP_002336518.1| predicted protein [Populus trichocarpa] gi|222835821|gb|EEE74256.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score =  265 bits (676), Expect = 1e-68
 Identities = 138/284 (48%), Positives = 192/284 (67%), Gaps = 12/284 (4%)
 Frame = -1

Query: 817 MEVVQVPPYFLWPFSLEIMSDPVTLSTGITYERKTIEKWMFTDKHNTCPVTKQPVFDYDF 638
           ME ++VP +FL P SL+IM DPV + TGITY+R++IEKW+F+ K++TCP+TK  +   + 
Sbjct: 1   MEDIEVPSFFLCPISLQIMKDPVIVPTGITYDRESIEKWLFSGKNDTCPITKLVISGCEV 60

Query: 637 TPNHNLRRLIQAWCATNASFGVERFPTPRPPVTKTDILSLLNEAKKPEYQINSLKKLRMI 458
           TPNH LRRLIQ+WC  NAS+G+ER PTP+PP+ KT +  LLN+AK P+ Q+  ++KLR I
Sbjct: 61  TPNHTLRRLIQSWCTLNASYGIERIPTPKPPINKTQVAKLLNDAKSPQQQVKCIRKLRSI 120

Query: 457 VLESDRNKHCVESTPGALDFLISIIKK-NINSFDTSA---------CDEALMILSSIQIS 308
             E++ NK C+E+  GA++FL+S++   N  SF+ ++          DEAL IL  ++IS
Sbjct: 121 ANENETNKRCMEAA-GAVEFLVSVVNNFNSLSFEETSDDGFEIARPGDEALSILYGLEIS 179

Query: 307 AQGLINLIK--SHDDLIHLFTSVMKKSNYQNRVHATLVLNSLIEATAPSKLIALKDELFI 134
             GL NLI   + + +I   T VM+  NY++R +A L+L S++E   P KLI+LK ELF 
Sbjct: 180 ESGLKNLIMGINGELIIETLTKVMQGGNYESRAYAVLLLKSMLEVADPLKLISLKHELFS 239

Query: 133 EVVKVLSDQISXXXXXXXXXXXXXLCPLGRNRVKAAEACAVSVL 2
           E+V+VL DQIS             LCP GRNR+KA EA AVSVL
Sbjct: 240 EIVQVLRDQISHKASNASLQLLINLCPWGRNRIKAIEAKAVSVL 283


>ref|XP_002265439.2| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Vitis vinifera]
          Length = 411

 Score =  264 bits (675), Expect = 2e-68
 Identities = 138/283 (48%), Positives = 187/283 (66%), Gaps = 11/283 (3%)
 Frame = -1

Query: 817 MEVVQVPPYFLWPFSLEIMSDPVTLSTGITYERKTIEKWMFTDKHNTCPVTKQPVF-DYD 641
           ME + VPP+FL P SLEIM DPVT+STGITY+R++IEKW+F+ K+NTCP TKQ +  D D
Sbjct: 1   MEEIDVPPFFLCPISLEIMKDPVTVSTGITYDRESIEKWLFSGKNNTCPATKQVLSADSD 60

Query: 640 FTPNHNLRRLIQAWCATNASFGVERFPTPRPPVTKTDILSLLNEAKKPEYQINSLKKLRM 461
            TPNH LRRLIQAWC  +AS GVER PTP+ P+ K  I+ LLN+AK P+ Q+  + KLR 
Sbjct: 61  LTPNHTLRRLIQAWCTLHASNGVERIPTPKIPINKIQIVKLLNDAKSPQLQMKCIGKLRA 120

Query: 460 IVLESDRNKHCVESTPGALDFLISIIKK-NINSFD---------TSACDEALMILSSIQI 311
           +  ESD NK C+ES  GA++FL SI+ K N  +F+          SA  EAL IL  + +
Sbjct: 121 LAAESDANKRCIESA-GAVEFLASIVSKANFTTFEEESDKGLESRSASSEALSILHYLLL 179

Query: 310 SAQGLINLIKSHDDLIHLFTSVMKKSNYQNRVHATLVLNSLIEATAPSKLIALKDELFIE 131
           S  GL  L+  + + +     V+++ NY++R +A ++L+S+++   P +LIALK E F+E
Sbjct: 180 SEAGLKKLVGKNGEFVGCLVRVLQRGNYESRAYAVMLLSSMLQVADPIQLIALKPEFFVE 239

Query: 130 VVKVLSDQISXXXXXXXXXXXXXLCPLGRNRVKAAEACAVSVL 2
            V+VL D IS             +CP GRN+VKA EA AVS+L
Sbjct: 240 AVQVLQDHISHQATKATLKLLIEVCPWGRNKVKAVEAGAVSIL 282


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