BLASTX nr result
ID: Dioscorea21_contig00027067
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00027067 (533 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002305733.1| predicted protein [Populus trichocarpa] gi|2... 280 9e-74 ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containi... 280 1e-73 emb|CBI30711.3| unnamed protein product [Vitis vinifera] 280 1e-73 ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containi... 277 6e-73 gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossyp... 276 1e-72 >ref|XP_002305733.1| predicted protein [Populus trichocarpa] gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa] Length = 571 Score = 280 bits (716), Expect = 9e-74 Identities = 126/177 (71%), Positives = 156/177 (88%) Frame = +2 Query: 2 LTDEGWRFFNIMRYEYKIEPKLEHYACMVDLCSRAGQLTKAYKFIESMPIKPDSTVWGAL 181 L DEGWRFFN+M+ E ++PKLEHYAC+VDL +R+G+L AYKFI+SMPI+PD+T+WGAL Sbjct: 315 LLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGAL 374 Query: 182 LCGCRIHRDVKLAERVAEHVFDLEPENTGYYILLANIYAEAEKWESVKKLRKRIAGRRLK 361 L GCRIH DVKLAE+VAEHVF+LEPENTGYY+LLAN YAEAEKWE VKKLR++I R LK Sbjct: 375 LSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIGRRGLK 434 Query: 362 KNPGCSWIEIKSRVQIFVSGDKSHPHSKKIELFLKRVQRRMKDEGHFPKKMYALMNA 532 KNPGCSWIE+KS+V IF++G+ SHP +KKIE+ LKR++ +MK+EG+FPK YAL+NA Sbjct: 435 KNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEEGYFPKTRYALINA 491 >ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750, chloroplastic-like [Vitis vinifera] Length = 824 Score = 280 bits (715), Expect = 1e-73 Identities = 130/177 (73%), Positives = 151/177 (85%) Frame = +2 Query: 2 LTDEGWRFFNIMRYEYKIEPKLEHYACMVDLCSRAGQLTKAYKFIESMPIKPDSTVWGAL 181 L DEGW FFN+MR IEPK EHYAC+VDL +RAG L+KAYKFI+ MPI+PD+T+WGAL Sbjct: 568 LLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGAL 627 Query: 182 LCGCRIHRDVKLAERVAEHVFDLEPENTGYYILLANIYAEAEKWESVKKLRKRIAGRRLK 361 LCGCRI+ DVKLAE+VAEHVF+LEPENTGYY+LLANIYAEAEKWE VKKLR+RI R L+ Sbjct: 628 LCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLR 687 Query: 362 KNPGCSWIEIKSRVQIFVSGDKSHPHSKKIELFLKRVQRRMKDEGHFPKKMYALMNA 532 KNPGCSWIEIK +V IFV+GD SHP + KIEL LK+ + RMK+EGHFPK YAL+ A Sbjct: 688 KNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKA 744 >emb|CBI30711.3| unnamed protein product [Vitis vinifera] Length = 697 Score = 280 bits (715), Expect = 1e-73 Identities = 130/177 (73%), Positives = 151/177 (85%) Frame = +2 Query: 2 LTDEGWRFFNIMRYEYKIEPKLEHYACMVDLCSRAGQLTKAYKFIESMPIKPDSTVWGAL 181 L DEGW FFN+MR IEPK EHYAC+VDL +RAG L+KAYKFI+ MPI+PD+T+WGAL Sbjct: 441 LLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGAL 500 Query: 182 LCGCRIHRDVKLAERVAEHVFDLEPENTGYYILLANIYAEAEKWESVKKLRKRIAGRRLK 361 LCGCRI+ DVKLAE+VAEHVF+LEPENTGYY+LLANIYAEAEKWE VKKLR+RI R L+ Sbjct: 501 LCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLR 560 Query: 362 KNPGCSWIEIKSRVQIFVSGDKSHPHSKKIELFLKRVQRRMKDEGHFPKKMYALMNA 532 KNPGCSWIEIK +V IFV+GD SHP + KIEL LK+ + RMK+EGHFPK YAL+ A Sbjct: 561 KNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKA 617 >ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750, chloroplastic-like [Cucumis sativus] gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750, chloroplastic-like [Cucumis sativus] Length = 926 Score = 277 bits (709), Expect = 6e-73 Identities = 127/177 (71%), Positives = 152/177 (85%) Frame = +2 Query: 2 LTDEGWRFFNIMRYEYKIEPKLEHYACMVDLCSRAGQLTKAYKFIESMPIKPDSTVWGAL 181 L DEGW+ FNIM+ E +IEP LEHYACMVDL +R G L KA+KFI++MPIKPD+T+WGAL Sbjct: 670 LLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGAL 729 Query: 182 LCGCRIHRDVKLAERVAEHVFDLEPENTGYYILLANIYAEAEKWESVKKLRKRIAGRRLK 361 LCGCRIH DVKLAE+VAE +F+LEPENTGYY+LLANIYAEAEKWE V+KLRK+I R LK Sbjct: 730 LCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLK 789 Query: 362 KNPGCSWIEIKSRVQIFVSGDKSHPHSKKIELFLKRVQRRMKDEGHFPKKMYALMNA 532 KNPGCSWIEIK ++ IFV+GD S P +KKIEL LKR++ +MK+EG+ PK YAL+NA Sbjct: 790 KNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMKEEGYSPKTAYALLNA 846 >gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii] Length = 667 Score = 276 bits (707), Expect = 1e-72 Identities = 125/178 (70%), Positives = 156/178 (87%), Gaps = 1/178 (0%) Frame = +2 Query: 2 LTDEGWRFFNIMRYEYKIEPKLEHYACMVDLCSRAGQLTKAYKFIESMPIKPDSTVWGAL 181 L ++GWRFF IM+ ++ IEPKLEHYACMVDL SR G L+KAYKFIE++PI PD+T+WGAL Sbjct: 410 LLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGAL 469 Query: 182 LCGCRIHRDVKLAERVAEHVFDLEPENTGYYILLANIYAEAEKWESVKKLRKRIAGRRLK 361 LCGCRI+ D++LAE+VAE VF+LEPENTGYY+LLANIYAEAEKWE VK++R++I + L+ Sbjct: 470 LCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLR 529 Query: 362 KNPGCSWIEIKSRVQIFVSG-DKSHPHSKKIELFLKRVQRRMKDEGHFPKKMYALMNA 532 KNPGCSWIEIK RV +FVSG + SHPHSKKIE LK+++R+MK+EG+FPK YAL+NA Sbjct: 530 KNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINA 587