BLASTX nr result

ID: Dioscorea21_contig00027067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027067
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305733.1| predicted protein [Populus trichocarpa] gi|2...   280   9e-74
ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containi...   280   1e-73
emb|CBI30711.3| unnamed protein product [Vitis vinifera]              280   1e-73
ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containi...   277   6e-73
gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossyp...   276   1e-72

>ref|XP_002305733.1| predicted protein [Populus trichocarpa] gi|222848697|gb|EEE86244.1|
           predicted protein [Populus trichocarpa]
          Length = 571

 Score =  280 bits (716), Expect = 9e-74
 Identities = 126/177 (71%), Positives = 156/177 (88%)
 Frame = +2

Query: 2   LTDEGWRFFNIMRYEYKIEPKLEHYACMVDLCSRAGQLTKAYKFIESMPIKPDSTVWGAL 181
           L DEGWRFFN+M+ E  ++PKLEHYAC+VDL +R+G+L  AYKFI+SMPI+PD+T+WGAL
Sbjct: 315 LLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGAL 374

Query: 182 LCGCRIHRDVKLAERVAEHVFDLEPENTGYYILLANIYAEAEKWESVKKLRKRIAGRRLK 361
           L GCRIH DVKLAE+VAEHVF+LEPENTGYY+LLAN YAEAEKWE VKKLR++I  R LK
Sbjct: 375 LSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIGRRGLK 434

Query: 362 KNPGCSWIEIKSRVQIFVSGDKSHPHSKKIELFLKRVQRRMKDEGHFPKKMYALMNA 532
           KNPGCSWIE+KS+V IF++G+ SHP +KKIE+ LKR++ +MK+EG+FPK  YAL+NA
Sbjct: 435 KNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEEGYFPKTRYALINA 491


>ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  280 bits (715), Expect = 1e-73
 Identities = 130/177 (73%), Positives = 151/177 (85%)
 Frame = +2

Query: 2    LTDEGWRFFNIMRYEYKIEPKLEHYACMVDLCSRAGQLTKAYKFIESMPIKPDSTVWGAL 181
            L DEGW FFN+MR    IEPK EHYAC+VDL +RAG L+KAYKFI+ MPI+PD+T+WGAL
Sbjct: 568  LLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGAL 627

Query: 182  LCGCRIHRDVKLAERVAEHVFDLEPENTGYYILLANIYAEAEKWESVKKLRKRIAGRRLK 361
            LCGCRI+ DVKLAE+VAEHVF+LEPENTGYY+LLANIYAEAEKWE VKKLR+RI  R L+
Sbjct: 628  LCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLR 687

Query: 362  KNPGCSWIEIKSRVQIFVSGDKSHPHSKKIELFLKRVQRRMKDEGHFPKKMYALMNA 532
            KNPGCSWIEIK +V IFV+GD SHP + KIEL LK+ + RMK+EGHFPK  YAL+ A
Sbjct: 688  KNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKA 744


>emb|CBI30711.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  280 bits (715), Expect = 1e-73
 Identities = 130/177 (73%), Positives = 151/177 (85%)
 Frame = +2

Query: 2   LTDEGWRFFNIMRYEYKIEPKLEHYACMVDLCSRAGQLTKAYKFIESMPIKPDSTVWGAL 181
           L DEGW FFN+MR    IEPK EHYAC+VDL +RAG L+KAYKFI+ MPI+PD+T+WGAL
Sbjct: 441 LLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGAL 500

Query: 182 LCGCRIHRDVKLAERVAEHVFDLEPENTGYYILLANIYAEAEKWESVKKLRKRIAGRRLK 361
           LCGCRI+ DVKLAE+VAEHVF+LEPENTGYY+LLANIYAEAEKWE VKKLR+RI  R L+
Sbjct: 501 LCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLR 560

Query: 362 KNPGCSWIEIKSRVQIFVSGDKSHPHSKKIELFLKRVQRRMKDEGHFPKKMYALMNA 532
           KNPGCSWIEIK +V IFV+GD SHP + KIEL LK+ + RMK+EGHFPK  YAL+ A
Sbjct: 561 KNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKA 617


>ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Cucumis sativus]
            gi|449500809|ref|XP_004161200.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  277 bits (709), Expect = 6e-73
 Identities = 127/177 (71%), Positives = 152/177 (85%)
 Frame = +2

Query: 2    LTDEGWRFFNIMRYEYKIEPKLEHYACMVDLCSRAGQLTKAYKFIESMPIKPDSTVWGAL 181
            L DEGW+ FNIM+ E +IEP LEHYACMVDL +R G L KA+KFI++MPIKPD+T+WGAL
Sbjct: 670  LLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGAL 729

Query: 182  LCGCRIHRDVKLAERVAEHVFDLEPENTGYYILLANIYAEAEKWESVKKLRKRIAGRRLK 361
            LCGCRIH DVKLAE+VAE +F+LEPENTGYY+LLANIYAEAEKWE V+KLRK+I  R LK
Sbjct: 730  LCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLK 789

Query: 362  KNPGCSWIEIKSRVQIFVSGDKSHPHSKKIELFLKRVQRRMKDEGHFPKKMYALMNA 532
            KNPGCSWIEIK ++ IFV+GD S P +KKIEL LKR++ +MK+EG+ PK  YAL+NA
Sbjct: 790  KNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMKEEGYSPKTAYALLNA 846


>gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score =  276 bits (707), Expect = 1e-72
 Identities = 125/178 (70%), Positives = 156/178 (87%), Gaps = 1/178 (0%)
 Frame = +2

Query: 2   LTDEGWRFFNIMRYEYKIEPKLEHYACMVDLCSRAGQLTKAYKFIESMPIKPDSTVWGAL 181
           L ++GWRFF IM+ ++ IEPKLEHYACMVDL SR G L+KAYKFIE++PI PD+T+WGAL
Sbjct: 410 LLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGAL 469

Query: 182 LCGCRIHRDVKLAERVAEHVFDLEPENTGYYILLANIYAEAEKWESVKKLRKRIAGRRLK 361
           LCGCRI+ D++LAE+VAE VF+LEPENTGYY+LLANIYAEAEKWE VK++R++I  + L+
Sbjct: 470 LCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLR 529

Query: 362 KNPGCSWIEIKSRVQIFVSG-DKSHPHSKKIELFLKRVQRRMKDEGHFPKKMYALMNA 532
           KNPGCSWIEIK RV +FVSG + SHPHSKKIE  LK+++R+MK+EG+FPK  YAL+NA
Sbjct: 530 KNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINA 587


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