BLASTX nr result
ID: Dioscorea21_contig00027058
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00027058 (401 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249... 125 5e-27 ref|XP_003593819.1| DNA polymerase III subunit gamma/tau [Medica... 119 3e-25 emb|CBI30725.3| unnamed protein product [Vitis vinifera] 119 3e-25 ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793... 117 1e-24 gb|ADN34025.1| DNA polymerase III gamma-tau subunit [Cucumis mel... 117 1e-24 >ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249702 [Vitis vinifera] Length = 1161 Score = 125 bits (313), Expect = 5e-27 Identities = 66/114 (57%), Positives = 81/114 (71%), Gaps = 12/114 (10%) Frame = +1 Query: 94 KDECKAISDHLRNHVHLTNCIHLRNHMHRHSP--AERSLVRDLIVLQRSRSLRDPSTSPQ 267 KD ISDHLRNH+HLTNCIHL+NHMH+HSP A+RS++RDLIVLQRSRSLRDPSTSP Sbjct: 11 KDANGDISDHLRNHIHLTNCIHLKNHMHKHSPILADRSIMRDLIVLQRSRSLRDPSTSPP 70 Query: 268 SWLSPSIVAMSGRRPLRDGLTHSGRRSLVG----------DANSPRVASVTASK 399 SW SPS++ + ++ D ++ GRRS VG +SP VAS+ SK Sbjct: 71 SWHSPSVIDLLSKKVENDAVSREGRRS-VGIERRREGRRLSGSSPTVASLATSK 123 >ref|XP_003593819.1| DNA polymerase III subunit gamma/tau [Medicago truncatula] gi|355482867|gb|AES64070.1| DNA polymerase III subunit gamma/tau [Medicago truncatula] Length = 1177 Score = 119 bits (298), Expect = 3e-25 Identities = 57/92 (61%), Positives = 72/92 (78%), Gaps = 2/92 (2%) Frame = +1 Query: 94 KDECKAISDHLRNHVHLTNCIHLRNHMHRHSP--AERSLVRDLIVLQRSRSLRDPSTSPQ 267 KD ISDH+RNH+HLTNCIHL+NHMH++SP A+RS++RDL+VLQRSRSLRDPS SP Sbjct: 11 KDANGDISDHIRNHIHLTNCIHLKNHMHKNSPIIADRSIMRDLVVLQRSRSLRDPSASPP 70 Query: 268 SWLSPSIVAMSGRRPLRDGLTHSGRRSLVGDA 363 SW SPS+V + +R DG + GRRS+ D+ Sbjct: 71 SWHSPSVVDLLFKRADNDGASQGGRRSVGNDS 102 >emb|CBI30725.3| unnamed protein product [Vitis vinifera] Length = 919 Score = 119 bits (297), Expect = 3e-25 Identities = 64/104 (61%), Positives = 75/104 (72%), Gaps = 2/104 (1%) Frame = +1 Query: 94 KDECKAISDHLRNHVHLTNCIHLRNHMHRHSP--AERSLVRDLIVLQRSRSLRDPSTSPQ 267 KD ISDHLRNH+HLTNCIHL+NHMH+HSP A+RS++RDLIVLQRSRSLRDPSTSP Sbjct: 11 KDANGDISDHLRNHIHLTNCIHLKNHMHKHSPILADRSIMRDLIVLQRSRSLRDPSTSPP 70 Query: 268 SWLSPSIVAMSGRRPLRDGLTHSGRRSLVGDANSPRVASVTASK 399 SW SPS++ D L+ GRR +SP VAS+ SK Sbjct: 71 SWHSPSVI---------DLLSKKGRRL---SGSSPTVASLATSK 102 >ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793832 [Glycine max] Length = 1191 Score = 117 bits (293), Expect = 1e-24 Identities = 56/88 (63%), Positives = 70/88 (79%), Gaps = 2/88 (2%) Frame = +1 Query: 94 KDECKAISDHLRNHVHLTNCIHLRNHMHRHSP--AERSLVRDLIVLQRSRSLRDPSTSPQ 267 KD ISDHLRNH+HLTNCIHL+NHMH++SP A+RS++RDL+VLQRSRSLRDPS SP Sbjct: 11 KDANGDISDHLRNHIHLTNCIHLKNHMHKNSPILADRSIMRDLVVLQRSRSLRDPSASPP 70 Query: 268 SWLSPSIVAMSGRRPLRDGLTHSGRRSL 351 SW SPS+V + +R D ++ GRRS+ Sbjct: 71 SWHSPSVVDLLFKRVENDAVSQGGRRSI 98 >gb|ADN34025.1| DNA polymerase III gamma-tau subunit [Cucumis melo subsp. melo] Length = 1170 Score = 117 bits (293), Expect = 1e-24 Identities = 63/107 (58%), Positives = 74/107 (69%), Gaps = 11/107 (10%) Frame = +1 Query: 112 ISDHLRNHVHLTNCIHLRNHMHRHSP--AERSLVRDLIVLQRSRSLRDPSTSPQSWLSPS 285 ISDHLRNH+HLTNCIHL+NHMH+HSP A+RSL+RDLIVLQRSRSLRDPS SP SW SPS Sbjct: 17 ISDHLRNHIHLTNCIHLKNHMHKHSPILADRSLMRDLIVLQRSRSLRDPSASPPSWQSPS 76 Query: 286 IVAMSGRRPLRDGLTHSGRRSL------VG---DANSPRVASVTASK 399 I + R + + GRRS+ VG +SP + S SK Sbjct: 77 ITDLPSRMGENNAVIREGRRSVGTESRRVGRTISGSSPPLGSFATSK 123