BLASTX nr result

ID: Dioscorea21_contig00027058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027058
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249...   125   5e-27
ref|XP_003593819.1| DNA polymerase III subunit gamma/tau [Medica...   119   3e-25
emb|CBI30725.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793...   117   1e-24
gb|ADN34025.1| DNA polymerase III gamma-tau subunit [Cucumis mel...   117   1e-24

>ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249702 [Vitis vinifera]
          Length = 1161

 Score =  125 bits (313), Expect = 5e-27
 Identities = 66/114 (57%), Positives = 81/114 (71%), Gaps = 12/114 (10%)
 Frame = +1

Query: 94  KDECKAISDHLRNHVHLTNCIHLRNHMHRHSP--AERSLVRDLIVLQRSRSLRDPSTSPQ 267
           KD    ISDHLRNH+HLTNCIHL+NHMH+HSP  A+RS++RDLIVLQRSRSLRDPSTSP 
Sbjct: 11  KDANGDISDHLRNHIHLTNCIHLKNHMHKHSPILADRSIMRDLIVLQRSRSLRDPSTSPP 70

Query: 268 SWLSPSIVAMSGRRPLRDGLTHSGRRSLVG----------DANSPRVASVTASK 399
           SW SPS++ +  ++   D ++  GRRS VG            +SP VAS+  SK
Sbjct: 71  SWHSPSVIDLLSKKVENDAVSREGRRS-VGIERRREGRRLSGSSPTVASLATSK 123


>ref|XP_003593819.1| DNA polymerase III subunit gamma/tau [Medicago truncatula]
           gi|355482867|gb|AES64070.1| DNA polymerase III subunit
           gamma/tau [Medicago truncatula]
          Length = 1177

 Score =  119 bits (298), Expect = 3e-25
 Identities = 57/92 (61%), Positives = 72/92 (78%), Gaps = 2/92 (2%)
 Frame = +1

Query: 94  KDECKAISDHLRNHVHLTNCIHLRNHMHRHSP--AERSLVRDLIVLQRSRSLRDPSTSPQ 267
           KD    ISDH+RNH+HLTNCIHL+NHMH++SP  A+RS++RDL+VLQRSRSLRDPS SP 
Sbjct: 11  KDANGDISDHIRNHIHLTNCIHLKNHMHKNSPIIADRSIMRDLVVLQRSRSLRDPSASPP 70

Query: 268 SWLSPSIVAMSGRRPLRDGLTHSGRRSLVGDA 363
           SW SPS+V +  +R   DG +  GRRS+  D+
Sbjct: 71  SWHSPSVVDLLFKRADNDGASQGGRRSVGNDS 102


>emb|CBI30725.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score =  119 bits (297), Expect = 3e-25
 Identities = 64/104 (61%), Positives = 75/104 (72%), Gaps = 2/104 (1%)
 Frame = +1

Query: 94  KDECKAISDHLRNHVHLTNCIHLRNHMHRHSP--AERSLVRDLIVLQRSRSLRDPSTSPQ 267
           KD    ISDHLRNH+HLTNCIHL+NHMH+HSP  A+RS++RDLIVLQRSRSLRDPSTSP 
Sbjct: 11  KDANGDISDHLRNHIHLTNCIHLKNHMHKHSPILADRSIMRDLIVLQRSRSLRDPSTSPP 70

Query: 268 SWLSPSIVAMSGRRPLRDGLTHSGRRSLVGDANSPRVASVTASK 399
           SW SPS++         D L+  GRR      +SP VAS+  SK
Sbjct: 71  SWHSPSVI---------DLLSKKGRRL---SGSSPTVASLATSK 102


>ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793832 [Glycine max]
          Length = 1191

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/88 (63%), Positives = 70/88 (79%), Gaps = 2/88 (2%)
 Frame = +1

Query: 94  KDECKAISDHLRNHVHLTNCIHLRNHMHRHSP--AERSLVRDLIVLQRSRSLRDPSTSPQ 267
           KD    ISDHLRNH+HLTNCIHL+NHMH++SP  A+RS++RDL+VLQRSRSLRDPS SP 
Sbjct: 11  KDANGDISDHLRNHIHLTNCIHLKNHMHKNSPILADRSIMRDLVVLQRSRSLRDPSASPP 70

Query: 268 SWLSPSIVAMSGRRPLRDGLTHSGRRSL 351
           SW SPS+V +  +R   D ++  GRRS+
Sbjct: 71  SWHSPSVVDLLFKRVENDAVSQGGRRSI 98


>gb|ADN34025.1| DNA polymerase III gamma-tau subunit [Cucumis melo subsp. melo]
          Length = 1170

 Score =  117 bits (293), Expect = 1e-24
 Identities = 63/107 (58%), Positives = 74/107 (69%), Gaps = 11/107 (10%)
 Frame = +1

Query: 112 ISDHLRNHVHLTNCIHLRNHMHRHSP--AERSLVRDLIVLQRSRSLRDPSTSPQSWLSPS 285
           ISDHLRNH+HLTNCIHL+NHMH+HSP  A+RSL+RDLIVLQRSRSLRDPS SP SW SPS
Sbjct: 17  ISDHLRNHIHLTNCIHLKNHMHKHSPILADRSLMRDLIVLQRSRSLRDPSASPPSWQSPS 76

Query: 286 IVAMSGRRPLRDGLTHSGRRSL------VG---DANSPRVASVTASK 399
           I  +  R    + +   GRRS+      VG     +SP + S   SK
Sbjct: 77  ITDLPSRMGENNAVIREGRRSVGTESRRVGRTISGSSPPLGSFATSK 123


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