BLASTX nr result

ID: Dioscorea21_contig00027045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027045
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322619.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22
emb|CBI30135.3| unnamed protein product [Vitis vinifera]              105   5e-21
ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containi...   105   5e-21
ref|XP_003624990.1| Pentatricopeptide repeat-containing protein ...   103   2e-20
ref|XP_004162628.1| PREDICTED: pentatricopeptide repeat-containi...   102   3e-20

>ref|XP_002322619.1| predicted protein [Populus trichocarpa] gi|222867249|gb|EEF04380.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score =  109 bits (273), Expect = 2e-22
 Identities = 52/67 (77%), Positives = 60/67 (89%)
 Frame = -3

Query: 202 YGKALQFAEWLETNKRLDFTERDYASYVDLIAKVHGIQKAEKYIEKIPKSLRGEVIYRTL 23
           +G+ALQ +EW+E NKR DF ERDYAS +DLIAKV G+QKAE YIEKIPKSL+GEVIYRTL
Sbjct: 52  FGRALQLSEWVEANKRKDFDERDYASRLDLIAKVRGLQKAEVYIEKIPKSLKGEVIYRTL 111

Query: 22  LANCVAA 2
           LANCV+A
Sbjct: 112 LANCVSA 118


>emb|CBI30135.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  105 bits (261), Expect = 5e-21
 Identities = 49/64 (76%), Positives = 57/64 (89%)
 Frame = -3

Query: 196 KALQFAEWLETNKRLDFTERDYASYVDLIAKVHGIQKAEKYIEKIPKSLRGEVIYRTLLA 17
           KALQF+EW+E +K+LD  ERDYAS VDLIAKV G+QKAE YIEKIPKS RGE++YRTLLA
Sbjct: 206 KALQFSEWMEEHKKLDMVERDYASRVDLIAKVRGLQKAEHYIEKIPKSFRGELVYRTLLA 265

Query: 16  NCVA 5
           NCV+
Sbjct: 266 NCVS 269


>ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Vitis vinifera]
          Length = 587

 Score =  105 bits (261), Expect = 5e-21
 Identities = 49/64 (76%), Positives = 57/64 (89%)
 Frame = -3

Query: 196 KALQFAEWLETNKRLDFTERDYASYVDLIAKVHGIQKAEKYIEKIPKSLRGEVIYRTLLA 17
           KALQF+EW+E +K+LD  ERDYAS VDLIAKV G+QKAE YIEKIPKS RGE++YRTLLA
Sbjct: 169 KALQFSEWMEEHKKLDMVERDYASRVDLIAKVRGLQKAEHYIEKIPKSFRGELVYRTLLA 228

Query: 16  NCVA 5
           NCV+
Sbjct: 229 NCVS 232


>ref|XP_003624990.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355500005|gb|AES81208.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 623

 Score =  103 bits (256), Expect = 2e-20
 Identities = 48/65 (73%), Positives = 56/65 (86%)
 Frame = -3

Query: 202 YGKALQFAEWLETNKRLDFTERDYASYVDLIAKVHGIQKAEKYIEKIPKSLRGEVIYRTL 23
           Y KALQ +EWLE+ K L+F ERDYAS +DLIAK+HG+ KAE YIEKIP+S RGE+IYRTL
Sbjct: 204 YLKALQLSEWLESKKHLEFVERDYASQLDLIAKLHGLHKAEVYIEKIPESFRGEIIYRTL 263

Query: 22  LANCV 8
           LANCV
Sbjct: 264 LANCV 268


>ref|XP_004162628.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Cucumis sativus]
          Length = 613

 Score =  102 bits (254), Expect = 3e-20
 Identities = 47/67 (70%), Positives = 56/67 (83%)
 Frame = -3

Query: 202 YGKALQFAEWLETNKRLDFTERDYASYVDLIAKVHGIQKAEKYIEKIPKSLRGEVIYRTL 23
           YGKALQF+EWLE N +LDF E+DYAS +DLI K+ G++ AE YI KIPKS +GEV+YRTL
Sbjct: 192 YGKALQFSEWLEANGKLDFVEKDYASRLDLIGKLRGLRMAENYIAKIPKSFQGEVVYRTL 251

Query: 22  LANCVAA 2
           LANCV A
Sbjct: 252 LANCVIA 258


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