BLASTX nr result

ID: Dioscorea21_contig00027044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027044
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624990.1| Pentatricopeptide repeat-containing protein ...   152   3e-35
emb|CBI30135.3| unnamed protein product [Vitis vinifera]              152   4e-35
ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containi...   152   4e-35
ref|XP_004162628.1| PREDICTED: pentatricopeptide repeat-containi...   150   1e-34
ref|NP_178143.1| pentatricopeptide repeat-containing protein [Ar...   149   3e-34

>ref|XP_003624990.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355500005|gb|AES81208.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 623

 Score =  152 bits (384), Expect = 3e-35
 Identities = 71/110 (64%), Positives = 89/110 (80%)
 Frame = -3

Query: 330 VEEGNALGRNEISTVMLNLRKWKFYGKALQFAEWLETNKRLDFTEREYASYVDLIAKVHG 151
           VE+G  L R EIS  M+NLR+ K Y KALQ +EWLE+ K L+F ER+YAS +DLIAK+HG
Sbjct: 180 VEDGKELSREEISLTMINLRRRKIYLKALQLSEWLESKKHLEFVERDYASQLDLIAKLHG 239

Query: 150 IQKAEKYIEKIPKSLRGEVIYRTLLANCVAAGNIKKSEEVFNRIRDLGFP 1
           + KAE YIEKIP+S RGE+IYRTLLANCV   N+KK+EE+FN+++DL FP
Sbjct: 240 LHKAEVYIEKIPESFRGEIIYRTLLANCVTQNNLKKAEEIFNKMKDLEFP 289


>emb|CBI30135.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  152 bits (383), Expect = 4e-35
 Identities = 72/109 (66%), Positives = 90/109 (82%)
 Frame = -3

Query: 327 EEGNALGRNEISTVMLNLRKWKFYGKALQFAEWLETNKRLDFTEREYASYVDLIAKVHGI 148
           +EG  + R EI+  MLNLRK + + KALQF+EW+E +K+LD  ER+YAS VDLIAKV G+
Sbjct: 181 QEGKDMSRAEIAQTMLNLRKIRMFLKALQFSEWMEEHKKLDMVERDYASRVDLIAKVRGL 240

Query: 147 QKAEKYIEKIPKSLRGEVIYRTLLANCVAAGNIKKSEEVFNRIRDLGFP 1
           QKAE YIEKIPKS RGE++YRTLLANCV+  N KK+EEVFN+++DLGFP
Sbjct: 241 QKAEHYIEKIPKSFRGELVYRTLLANCVSTTNAKKAEEVFNKMKDLGFP 289


>ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Vitis vinifera]
          Length = 587

 Score =  152 bits (383), Expect = 4e-35
 Identities = 72/109 (66%), Positives = 90/109 (82%)
 Frame = -3

Query: 327 EEGNALGRNEISTVMLNLRKWKFYGKALQFAEWLETNKRLDFTEREYASYVDLIAKVHGI 148
           +EG  + R EI+  MLNLRK + + KALQF+EW+E +K+LD  ER+YAS VDLIAKV G+
Sbjct: 144 QEGKDMSRAEIAQTMLNLRKIRMFLKALQFSEWMEEHKKLDMVERDYASRVDLIAKVRGL 203

Query: 147 QKAEKYIEKIPKSLRGEVIYRTLLANCVAAGNIKKSEEVFNRIRDLGFP 1
           QKAE YIEKIPKS RGE++YRTLLANCV+  N KK+EEVFN+++DLGFP
Sbjct: 204 QKAEHYIEKIPKSFRGELVYRTLLANCVSTTNAKKAEEVFNKMKDLGFP 252


>ref|XP_004162628.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Cucumis sativus]
          Length = 613

 Score =  150 bits (379), Expect = 1e-34
 Identities = 70/110 (63%), Positives = 90/110 (81%)
 Frame = -3

Query: 330 VEEGNALGRNEISTVMLNLRKWKFYGKALQFAEWLETNKRLDFTEREYASYVDLIAKVHG 151
           V EG  L R++IS+ MLNLRK + YGKALQF+EWLE N +LDF E++YAS +DLI K+ G
Sbjct: 168 VSEGKELSRDDISSAMLNLRKCRMYGKALQFSEWLEANGKLDFVEKDYASRLDLIGKLRG 227

Query: 150 IQKAEKYIEKIPKSLRGEVIYRTLLANCVAAGNIKKSEEVFNRIRDLGFP 1
           ++ AE YI KIPKS +GEV+YRTLLANCV A N++K+EEVFN+++DL FP
Sbjct: 228 LRMAENYIAKIPKSFQGEVVYRTLLANCVIACNVQKAEEVFNKMKDLEFP 277


>ref|NP_178143.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|42572199|ref|NP_974190.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|145327755|ref|NP_001077853.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|75262222|sp|Q9C977.1|PP135_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g80270, mitochondrial; Flags: Precursor
           gi|12324975|gb|AAG52431.1|AC018848_2 hypothetical
           protein; 8785-10851 [Arabidopsis thaliana]
           gi|17064898|gb|AAL32603.1| Unknown protein [Arabidopsis
           thaliana] gi|20259918|gb|AAM13306.1| unknown protein
           [Arabidopsis thaliana] gi|332198258|gb|AEE36379.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana] gi|332198259|gb|AEE36380.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|332198260|gb|AEE36381.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 596

 Score =  149 bits (375), Expect = 3e-34
 Identities = 68/110 (61%), Positives = 90/110 (81%)
 Frame = -3

Query: 330 VEEGNALGRNEISTVMLNLRKWKFYGKALQFAEWLETNKRLDFTEREYASYVDLIAKVHG 151
           VEEGN + R EI+  ML LR+ + YG+ALQ +EWLE NK+++ TER+YAS +DL  K+ G
Sbjct: 152 VEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDYASRLDLTVKIRG 211

Query: 150 IQKAEKYIEKIPKSLRGEVIYRTLLANCVAAGNIKKSEEVFNRIRDLGFP 1
           ++K E  ++KIPKS +GEV+YRTLLANCVAAGN+KKSE VFN+++DLGFP
Sbjct: 212 LEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLGFP 261


Top