BLASTX nr result

ID: Dioscorea21_contig00027043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027043
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322619.1| predicted protein [Populus trichocarpa] gi|2...   108   5e-22
emb|CBI30135.3| unnamed protein product [Vitis vinifera]              105   5e-21
ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containi...   105   5e-21
ref|XP_003624990.1| Pentatricopeptide repeat-containing protein ...   102   4e-20
ref|XP_004162628.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19

>ref|XP_002322619.1| predicted protein [Populus trichocarpa] gi|222867249|gb|EEF04380.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score =  108 bits (270), Expect = 5e-22
 Identities = 52/66 (78%), Positives = 59/66 (89%)
 Frame = -2

Query: 199 GKALQFAEWLETNKRLDFTERDYASYVDLIAKVHGIQKAEKYIEKIPKSLRGEVIYRTLL 20
           G+ALQ +EW+E NKR DF ERDYAS +DLIAKV G+QKAE YIEKIPKSL+GEVIYRTLL
Sbjct: 53  GRALQLSEWVEANKRKDFDERDYASRLDLIAKVRGLQKAEVYIEKIPKSLKGEVIYRTLL 112

Query: 19  ANCVAA 2
           ANCV+A
Sbjct: 113 ANCVSA 118


>emb|CBI30135.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  105 bits (261), Expect = 5e-21
 Identities = 49/64 (76%), Positives = 57/64 (89%)
 Frame = -2

Query: 196 KALQFAEWLETNKRLDFTERDYASYVDLIAKVHGIQKAEKYIEKIPKSLRGEVIYRTLLA 17
           KALQF+EW+E +K+LD  ERDYAS VDLIAKV G+QKAE YIEKIPKS RGE++YRTLLA
Sbjct: 206 KALQFSEWMEEHKKLDMVERDYASRVDLIAKVRGLQKAEHYIEKIPKSFRGELVYRTLLA 265

Query: 16  NCVA 5
           NCV+
Sbjct: 266 NCVS 269


>ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Vitis vinifera]
          Length = 587

 Score =  105 bits (261), Expect = 5e-21
 Identities = 49/64 (76%), Positives = 57/64 (89%)
 Frame = -2

Query: 196 KALQFAEWLETNKRLDFTERDYASYVDLIAKVHGIQKAEKYIEKIPKSLRGEVIYRTLLA 17
           KALQF+EW+E +K+LD  ERDYAS VDLIAKV G+QKAE YIEKIPKS RGE++YRTLLA
Sbjct: 169 KALQFSEWMEEHKKLDMVERDYASRVDLIAKVRGLQKAEHYIEKIPKSFRGELVYRTLLA 228

Query: 16  NCVA 5
           NCV+
Sbjct: 229 NCVS 232


>ref|XP_003624990.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355500005|gb|AES81208.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 623

 Score =  102 bits (253), Expect = 4e-20
 Identities = 47/63 (74%), Positives = 55/63 (87%)
 Frame = -2

Query: 196 KALQFAEWLETNKRLDFTERDYASYVDLIAKVHGIQKAEKYIEKIPKSLRGEVIYRTLLA 17
           KALQ +EWLE+ K L+F ERDYAS +DLIAK+HG+ KAE YIEKIP+S RGE+IYRTLLA
Sbjct: 206 KALQLSEWLESKKHLEFVERDYASQLDLIAKLHGLHKAEVYIEKIPESFRGEIIYRTLLA 265

Query: 16  NCV 8
           NCV
Sbjct: 266 NCV 268


>ref|XP_004162628.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Cucumis sativus]
          Length = 613

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 46/66 (69%), Positives = 55/66 (83%)
 Frame = -2

Query: 199 GKALQFAEWLETNKRLDFTERDYASYVDLIAKVHGIQKAEKYIEKIPKSLRGEVIYRTLL 20
           GKALQF+EWLE N +LDF E+DYAS +DLI K+ G++ AE YI KIPKS +GEV+YRTLL
Sbjct: 193 GKALQFSEWLEANGKLDFVEKDYASRLDLIGKLRGLRMAENYIAKIPKSFQGEVVYRTLL 252

Query: 19  ANCVAA 2
           ANCV A
Sbjct: 253 ANCVIA 258


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