BLASTX nr result

ID: Dioscorea21_contig00027038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027038
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003578470.1| PREDICTED: ribosomal RNA processing protein ...   141   6e-32
ref|XP_002460547.1| hypothetical protein SORBIDRAFT_02g030390 [S...   138   4e-31
gb|EAZ09809.1| hypothetical protein OsI_32097 [Oryza sativa Indi...   136   2e-30
gb|ABG73439.1| unknown protein [Oryza brachyantha]                    135   3e-30
dbj|BAK05292.1| predicted protein [Hordeum vulgare subsp. vulgare]    135   4e-30

>ref|XP_003578470.1| PREDICTED: ribosomal RNA processing protein 36 homolog
           [Brachypodium distachyon]
          Length = 277

 Score =  141 bits (355), Expect = 6e-32
 Identities = 68/99 (68%), Positives = 80/99 (80%)
 Frame = -3

Query: 349 RDPTVIKELEEHLCWIDKQLQSAQQKKVGSRVLSEHIKKEKEAAKQGKRPYYLKKSEIRQ 170
           +DP  I+E++ H+ WIDKQL+S  QK V S +L  HIKKE+EAAK GKRPYYLKKSEIR+
Sbjct: 174 KDPNAIEEMKSHITWIDKQLRSNPQKNVESEILRGHIKKEREAAKTGKRPYYLKKSEIRE 233

Query: 169 GELVKKYEGLKAAGKLDSFIEKRRKRNALKDIRYMPYRR 53
            +LV KY  LK AGKLD+FIEKRRK+NA KD RYMPYRR
Sbjct: 234 RKLVDKYNELKEAGKLDAFIEKRRKKNASKDHRYMPYRR 272


>ref|XP_002460547.1| hypothetical protein SORBIDRAFT_02g030390 [Sorghum bicolor]
           gi|241923924|gb|EER97068.1| hypothetical protein
           SORBIDRAFT_02g030390 [Sorghum bicolor]
          Length = 274

 Score =  138 bits (348), Expect = 4e-31
 Identities = 64/103 (62%), Positives = 81/103 (78%)
 Frame = -3

Query: 349 RDPTVIKELEEHLCWIDKQLQSAQQKKVGSRVLSEHIKKEKEAAKQGKRPYYLKKSEIRQ 170
           +DP  I+E++  + WIDKQL+S  QK + S +L EHIKKE+EAAK GKRPYYLKKSE+R+
Sbjct: 171 KDPNAIEEMKSRVTWIDKQLKSHPQKNIESEILREHIKKEREAAKSGKRPYYLKKSELRE 230

Query: 169 GELVKKYEGLKAAGKLDSFIEKRRKRNALKDIRYMPYRRTNKD 41
            +L+ KY  LK AGKLD+FIE+RR++NA KD RYMPYRR   D
Sbjct: 231 RKLMNKYNELKEAGKLDAFIERRRRKNASKDHRYMPYRRNGDD 273


>gb|EAZ09809.1| hypothetical protein OsI_32097 [Oryza sativa Indica Group]
          Length = 270

 Score =  136 bits (342), Expect = 2e-30
 Identities = 64/99 (64%), Positives = 80/99 (80%)
 Frame = -3

Query: 349 RDPTVIKELEEHLCWIDKQLQSAQQKKVGSRVLSEHIKKEKEAAKQGKRPYYLKKSEIRQ 170
           +DP  I+E++  + WIDKQL+S  +K V S +L EHIKKE+EAAK GKRPYYLKKSEIR+
Sbjct: 167 KDPNAIEEMKSRITWIDKQLRSHPKKNVESEILREHIKKEREAAKTGKRPYYLKKSEIRE 226

Query: 169 GELVKKYEGLKAAGKLDSFIEKRRKRNALKDIRYMPYRR 53
            +L+ KY  LK AGKLD+F+EKRR++NA KD RYMPYRR
Sbjct: 227 RKLMNKYNELKEAGKLDAFMEKRRRKNASKDHRYMPYRR 265


>gb|ABG73439.1| unknown protein [Oryza brachyantha]
          Length = 281

 Score =  135 bits (340), Expect = 3e-30
 Identities = 64/99 (64%), Positives = 80/99 (80%)
 Frame = -3

Query: 349 RDPTVIKELEEHLCWIDKQLQSAQQKKVGSRVLSEHIKKEKEAAKQGKRPYYLKKSEIRQ 170
           +DP  I+E++  L WIDKQL+S  +K V S +L EHIKKE+EAAK GK+PYYLKKSEIR+
Sbjct: 177 KDPNAIEEMKSRLTWIDKQLRSHPRKNVESEILREHIKKEREAAKTGKQPYYLKKSEIRE 236

Query: 169 GELVKKYEGLKAAGKLDSFIEKRRKRNALKDIRYMPYRR 53
            +L+ KY  LK AGKLD+F+EKRR++NA KD RYMPYRR
Sbjct: 237 RKLMNKYNELKEAGKLDAFMEKRRRKNASKDHRYMPYRR 275


>dbj|BAK05292.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 279

 Score =  135 bits (339), Expect = 4e-30
 Identities = 65/99 (65%), Positives = 79/99 (79%)
 Frame = -3

Query: 349 RDPTVIKELEEHLCWIDKQLQSAQQKKVGSRVLSEHIKKEKEAAKQGKRPYYLKKSEIRQ 170
           +DP  I+E++  + WIDKQL+S  QK V S +L  HIKKE+EAAK GKRPYYLKKSEIR+
Sbjct: 176 KDPNAIEEVKNQITWIDKQLRSNPQKNVESEILRGHIKKEREAAKAGKRPYYLKKSEIRE 235

Query: 169 GELVKKYEGLKAAGKLDSFIEKRRKRNALKDIRYMPYRR 53
            +L+ KY  LK AGKLDSF+EKRRK+NA KD R+MPYRR
Sbjct: 236 RKLMDKYNELKEAGKLDSFMEKRRKKNASKDHRFMPYRR 274


Top