BLASTX nr result

ID: Dioscorea21_contig00027037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027037
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148780.1| PREDICTED: probable ATP-dependent RNA helica...   140   8e-32
ref|NP_001042377.1| Os01g0212100 [Oryza sativa Japonica Group] g...   140   1e-31
gb|ACY66873.1| P10Sh95F04 [Saccharum hybrid cultivar R570]            140   1e-31
ref|XP_002457146.1| hypothetical protein SORBIDRAFT_03g002030 [S...   140   1e-31
gb|EEC70159.1| hypothetical protein OsI_00870 [Oryza sativa Indi...   140   1e-31

>ref|XP_004148780.1| PREDICTED: probable ATP-dependent RNA helicase DHX35-like [Cucumis
           sativus] gi|449515633|ref|XP_004164853.1| PREDICTED:
           probable ATP-dependent RNA helicase DHX35-like [Cucumis
           sativus]
          Length = 696

 Score =  140 bits (354), Expect = 8e-32
 Identities = 70/77 (90%), Positives = 75/77 (97%)
 Frame = -1

Query: 233 RLAVQSVSARVAEEMGVKLGEEVGYTIRFEDVTNPGVTMIKFLTDGVLLREMMDDPLLTK 54
           RLAVQ+V++RVAEEMGVKLGEEVGYTIRFED+TNP VT +KFLTDGVLLREMMDDPLLTK
Sbjct: 104 RLAVQAVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVKFLTDGVLLREMMDDPLLTK 163

Query: 53  YSVIMVDEAHERSISTD 3
           YSVIMVDEAHERSISTD
Sbjct: 164 YSVIMVDEAHERSISTD 180


>ref|NP_001042377.1| Os01g0212100 [Oryza sativa Japonica Group]
           gi|56201516|dbj|BAD73035.1| putative DEAH
           (Asp-Glu-Ala-His) box polypeptide 35 [Oryza sativa
           Japonica Group] gi|113531908|dbj|BAF04291.1|
           Os01g0212100 [Oryza sativa Japonica Group]
           gi|215715323|dbj|BAG95074.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222617969|gb|EEE54101.1| hypothetical protein
           OsJ_00855 [Oryza sativa Japonica Group]
          Length = 700

 Score =  140 bits (352), Expect = 1e-31
 Identities = 69/77 (89%), Positives = 76/77 (98%)
 Frame = -1

Query: 233 RLAVQSVSARVAEEMGVKLGEEVGYTIRFEDVTNPGVTMIKFLTDGVLLREMMDDPLLTK 54
           RLAVQSV++RVAEE+GV+LGEEVGYTIRFED TNPG+TMIKFLTDGVL+REMM+DPLLTK
Sbjct: 107 RLAVQSVASRVAEEVGVRLGEEVGYTIRFEDQTNPGMTMIKFLTDGVLIREMMEDPLLTK 166

Query: 53  YSVIMVDEAHERSISTD 3
           YSVIMVDEAHERSISTD
Sbjct: 167 YSVIMVDEAHERSISTD 183


>gb|ACY66873.1| P10Sh95F04 [Saccharum hybrid cultivar R570]
          Length = 704

 Score =  140 bits (352), Expect = 1e-31
 Identities = 69/77 (89%), Positives = 76/77 (98%)
 Frame = -1

Query: 233 RLAVQSVSARVAEEMGVKLGEEVGYTIRFEDVTNPGVTMIKFLTDGVLLREMMDDPLLTK 54
           RLAVQ+V++RVAEE+GVKLGEEVGYTIRFED TNPG+TMIKFLTDGVL+REMM+DPLLTK
Sbjct: 107 RLAVQTVASRVAEEVGVKLGEEVGYTIRFEDQTNPGMTMIKFLTDGVLIREMMEDPLLTK 166

Query: 53  YSVIMVDEAHERSISTD 3
           YSVIMVDEAHERSISTD
Sbjct: 167 YSVIMVDEAHERSISTD 183


>ref|XP_002457146.1| hypothetical protein SORBIDRAFT_03g002030 [Sorghum bicolor]
           gi|241929121|gb|EES02266.1| hypothetical protein
           SORBIDRAFT_03g002030 [Sorghum bicolor]
          Length = 700

 Score =  140 bits (352), Expect = 1e-31
 Identities = 69/77 (89%), Positives = 76/77 (98%)
 Frame = -1

Query: 233 RLAVQSVSARVAEEMGVKLGEEVGYTIRFEDVTNPGVTMIKFLTDGVLLREMMDDPLLTK 54
           RLAVQ+V++RVAEE+GVKLGEEVGYTIRFED TNPG+TMIKFLTDGVL+REMM+DPLLTK
Sbjct: 107 RLAVQTVASRVAEEVGVKLGEEVGYTIRFEDQTNPGMTMIKFLTDGVLIREMMEDPLLTK 166

Query: 53  YSVIMVDEAHERSISTD 3
           YSVIMVDEAHERSISTD
Sbjct: 167 YSVIMVDEAHERSISTD 183


>gb|EEC70159.1| hypothetical protein OsI_00870 [Oryza sativa Indica Group]
          Length = 637

 Score =  140 bits (352), Expect = 1e-31
 Identities = 69/77 (89%), Positives = 76/77 (98%)
 Frame = -1

Query: 233 RLAVQSVSARVAEEMGVKLGEEVGYTIRFEDVTNPGVTMIKFLTDGVLLREMMDDPLLTK 54
           RLAVQSV++RVAEE+GV+LGEEVGYTIRFED TNPG+TMIKFLTDGVL+REMM+DPLLTK
Sbjct: 107 RLAVQSVASRVAEEVGVRLGEEVGYTIRFEDQTNPGMTMIKFLTDGVLIREMMEDPLLTK 166

Query: 53  YSVIMVDEAHERSISTD 3
           YSVIMVDEAHERSISTD
Sbjct: 167 YSVIMVDEAHERSISTD 183


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