BLASTX nr result

ID: Dioscorea21_contig00027036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027036
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helica...   184   7e-45
emb|CBI30650.3| unnamed protein product [Vitis vinifera]              184   7e-45
ref|NP_001042377.1| Os01g0212100 [Oryza sativa Japonica Group] g...   179   2e-43
gb|ACY66873.1| P10Sh95F04 [Saccharum hybrid cultivar R570]            179   2e-43
gb|EEC70159.1| hypothetical protein OsI_00870 [Oryza sativa Indi...   179   2e-43

>ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helicase DHX35 [Vitis
           vinifera]
          Length = 695

 Score =  184 bits (467), Expect = 7e-45
 Identities = 93/133 (69%), Positives = 112/133 (84%)
 Frame = -1

Query: 400 LLGLLKKIQRRRPELRLIISSATIEARSMSNFFHDRKRNQGDAANDSAPNTVPAILSVEG 221
           LLGLLKKIQRRRPELRLIISSATIEA+SMS FF   ++ +G    +S P T PAILSVEG
Sbjct: 181 LLGLLKKIQRRRPELRLIISSATIEAKSMSTFFQTSRKRRGLEGEESGPRTDPAILSVEG 240

Query: 220 KGFTVEIYYLEEPCSSYLQAAVDTVLSIHDKEPVGDILVFLTGQDDIDAAVQLINENALD 41
           +GF V+I+++EEP   YLQAAV TVLSIH++EP+GDILVFLTG++DIDAAVQL+NE A +
Sbjct: 241 RGFNVQIHHIEEPVPDYLQAAVSTVLSIHEQEPMGDILVFLTGENDIDAAVQLLNEEAQN 300

Query: 40  HRSHSSGLLVLPL 2
           +  HSSGL+VLPL
Sbjct: 301 NGKHSSGLVVLPL 313


>emb|CBI30650.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score =  184 bits (467), Expect = 7e-45
 Identities = 96/133 (72%), Positives = 113/133 (84%)
 Frame = -1

Query: 400 LLGLLKKIQRRRPELRLIISSATIEARSMSNFFHDRKRNQGDAANDSAPNTVPAILSVEG 221
           LLGLLKKIQRRRPELRLIISSATIEA+SMS FF  RKR +G    +S P T PAILSVEG
Sbjct: 181 LLGLLKKIQRRRPELRLIISSATIEAKSMSTFFQTRKR-RGLEGEESGPRTDPAILSVEG 239

Query: 220 KGFTVEIYYLEEPCSSYLQAAVDTVLSIHDKEPVGDILVFLTGQDDIDAAVQLINENALD 41
           +GF V+I+++EEP   YLQAAV TVLSIH++EP+GDILVFLTG++DIDAAVQL+NE A +
Sbjct: 240 RGFNVQIHHIEEPVPDYLQAAVSTVLSIHEQEPMGDILVFLTGENDIDAAVQLLNEEAQN 299

Query: 40  HRSHSSGLLVLPL 2
           +  HSSGL+VLPL
Sbjct: 300 NGKHSSGLVVLPL 312


>ref|NP_001042377.1| Os01g0212100 [Oryza sativa Japonica Group]
           gi|56201516|dbj|BAD73035.1| putative DEAH
           (Asp-Glu-Ala-His) box polypeptide 35 [Oryza sativa
           Japonica Group] gi|113531908|dbj|BAF04291.1|
           Os01g0212100 [Oryza sativa Japonica Group]
           gi|215715323|dbj|BAG95074.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222617969|gb|EEE54101.1| hypothetical protein
           OsJ_00855 [Oryza sativa Japonica Group]
          Length = 700

 Score =  179 bits (455), Expect = 2e-43
 Identities = 94/133 (70%), Positives = 108/133 (81%)
 Frame = -1

Query: 400 LLGLLKKIQRRRPELRLIISSATIEARSMSNFFHDRKRNQGDAANDSAPNTVPAILSVEG 221
           LLGLLKKIQRRRP+LRLIISSATIEARSMS FF+ R++N    + D  PN  PAILSVEG
Sbjct: 185 LLGLLKKIQRRRPDLRLIISSATIEARSMSTFFNIRRKNSMLESADHLPNPEPAILSVEG 244

Query: 220 KGFTVEIYYLEEPCSSYLQAAVDTVLSIHDKEPVGDILVFLTGQDDIDAAVQLINENALD 41
           KG+TVEI+Y+EEP S YLQAAV+TVL IH+KEP GDILVFLTGQDDIDAAV+++NE    
Sbjct: 245 KGYTVEIHYVEEPVSDYLQAAVNTVLIIHEKEPPGDILVFLTGQDDIDAAVKMLNEEIQH 304

Query: 40  HRSHSSGLLVLPL 2
              H   LL+LPL
Sbjct: 305 RGRHYLDLLILPL 317


>gb|ACY66873.1| P10Sh95F04 [Saccharum hybrid cultivar R570]
          Length = 704

 Score =  179 bits (455), Expect = 2e-43
 Identities = 94/133 (70%), Positives = 110/133 (82%)
 Frame = -1

Query: 400 LLGLLKKIQRRRPELRLIISSATIEARSMSNFFHDRKRNQGDAANDSAPNTVPAILSVEG 221
           LLGLLKKIQRRRPELRLIISSATIEARSMS+FF+ R++N    ++D  P+  PAILSVEG
Sbjct: 185 LLGLLKKIQRRRPELRLIISSATIEARSMSSFFNTRRKNSLLGSSDDLPSPEPAILSVEG 244

Query: 220 KGFTVEIYYLEEPCSSYLQAAVDTVLSIHDKEPVGDILVFLTGQDDIDAAVQLINENALD 41
           KG+TVEI+Y+EEP S YLQAAV+TVL IH+KEP GDILVFLTGQDDI+AAV+L+NE    
Sbjct: 245 KGYTVEIHYVEEPVSDYLQAAVNTVLLIHEKEPPGDILVFLTGQDDIEAAVKLLNEEIQH 304

Query: 40  HRSHSSGLLVLPL 2
              H   LL+LPL
Sbjct: 305 LGRHYLDLLILPL 317


>gb|EEC70159.1| hypothetical protein OsI_00870 [Oryza sativa Indica Group]
          Length = 637

 Score =  179 bits (455), Expect = 2e-43
 Identities = 94/133 (70%), Positives = 108/133 (81%)
 Frame = -1

Query: 400 LLGLLKKIQRRRPELRLIISSATIEARSMSNFFHDRKRNQGDAANDSAPNTVPAILSVEG 221
           LLGLLKKIQRRRP+LRLIISSATIEARSMS FF+ R++N    + D  PN  PAILSVEG
Sbjct: 185 LLGLLKKIQRRRPDLRLIISSATIEARSMSTFFNIRRKNSMLESADHLPNPEPAILSVEG 244

Query: 220 KGFTVEIYYLEEPCSSYLQAAVDTVLSIHDKEPVGDILVFLTGQDDIDAAVQLINENALD 41
           KG+TVEI+Y+EEP S YLQAAV+TVL IH+KEP GDILVFLTGQDDIDAAV+++NE    
Sbjct: 245 KGYTVEIHYVEEPVSDYLQAAVNTVLIIHEKEPPGDILVFLTGQDDIDAAVKMLNEEIQH 304

Query: 40  HRSHSSGLLVLPL 2
              H   LL+LPL
Sbjct: 305 RGRHYLDLLILPL 317


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